| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1273 |
|---|
| Symbol | |
|---|
| ID | 8357389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1523513 |
|---|
| End bp | 1525075 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644963429 |
|---|
| Product | protein of unknown function DUF853 NPT hydrolase putative |
|---|
| Protein accession | YP_003120972 |
|---|
| Protein GI | 256420319 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.50823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGA AAGAAGCATT TCTGGAATAT ATCCGCAATG GTTATTCCTT TAAGGGTGAA
CACGTTAAGC TTGGATGCGC CATGCTGGAT GGCGAAGTTG TAACCGGCGC TGATGTATTT
ATACCCCTGA AAACACTCAA CAGACACGGT CTCATTGCCG GCGCCACCGG TACCGGTAAA
ACAAAAACCC TGCAGGTCAT CGCAGAAGCA CTCAGCGACG CAAGCGTTCC TGTCCTGCTG
ATGGACATCA AAGGCGACCT GAGTGGTGTG GCCGCTGCCG GTACAAGCAA TGCAAAAATT
GAAGAGCGTT ATCAGAAAAT AGGCGGCAGC TGGTCTGCAT CTGCCTACCC CGTGGAACTG
CTCTCCCTCA GTAATGAAAA AGGCGCACGC CTACGTGCGA CCGTCAGTGA ATTCGGTCCC
ATATTACTCT CTAAGATCCT CGAACTGAAC GATACCCAGG AAGGACTGGT ATCCATGATC
TTCAAATATT GCGATGACAG TAAACTCCCG CTGCTCGACC TGAAAGACTT TAAGAAAGTA
CTACAATATG TCAGCGACAA GGGTAAAGCG GATATGGAGA AGGATTATGG TAAAATCTCC
ACCACTTCTG CCGGCACCAT CCTCCGGAAG GTAATCGGAC TGGAACAACA AGGTGCCGAC
CGTTTCTTTG GAGAAGCCTC CTTTGAAGTG GACGACCTGA TGCATATCAG TGATGATGGC
CGTGGTGTGA TATCTATTGT GAGAGTCGCC GACATCCAGG ACCGTCCGAA GCTGTTCTCG
ACGTTCATGT TAAGTCTCCT GGCGGAACTC TATGCCTCCC TGCCGGAAGA AGGCGATCTG
GAAAAACCAA AACTGGTAAT GTTCATCGAT GAAGCACACC TCATATTCCA GGAAGCCAGC
ACAGCCCTCC TGCAACAGAT AGAAACCATC ATTAAACTGA TCCGCTCAAA AGGCGTAGGT
ATATTCTTCT GTACACAGAA CCCGATGGAC GTACCACCTT CCGTACTGGG ACAACTGGGA
ATGAAAGTAC AACATGCGCT ACGCGCGTTT ACTGCGAATG ATAGAAAAGC GATCAAACAA
ACCGCAGAAA ACTATCCACT CTCGGAATTC TATAAAACGG ATGATCTGCT CACGCAGATC
GGTATAGGAG AAGCACTCTT TACCTGTCTG AATGAAAAAG GCCAGCCTAC ACCACTTGCC
GCCACCATGC TCGTATCTCC CCGTTCCCGT ATGGACGTGC TGACCGATAC TGAAGCTGAT
ACACTAGTGA ATGGATCCAA GCTGGTGAAG AAATATAACC GCGAAATAGA CAGCGAAAGT
GCGTACGAGA TACTAACTGC CAAACTTCAG GAAGCAGCCG AAAAAACGGC AGAAGAAAAG
CAGGAAAAGC CTGCTGCAAA AGGTGGCAGA CAGAAAGAAG AAAAGAGTGT GTTGGAAACT
GTACTGACCA GTTCTGCGGC CAGACAGGTA GGTCGTACTG CCGCTAATAT CATTACCCGC
AGTCTGCTGG GCGCCCTTGG CCTCGGTGGC AAAAGCAGCA AAAAAAGCAG CAGCTGGTTC
TGA
|
|---|
| Protein sequence | MATKEAFLEY IRNGYSFKGE HVKLGCAMLD GEVVTGADVF IPLKTLNRHG LIAGATGTGK
TKTLQVIAEA LSDASVPVLL MDIKGDLSGV AAAGTSNAKI EERYQKIGGS WSASAYPVEL
LSLSNEKGAR LRATVSEFGP ILLSKILELN DTQEGLVSMI FKYCDDSKLP LLDLKDFKKV
LQYVSDKGKA DMEKDYGKIS TTSAGTILRK VIGLEQQGAD RFFGEASFEV DDLMHISDDG
RGVISIVRVA DIQDRPKLFS TFMLSLLAEL YASLPEEGDL EKPKLVMFID EAHLIFQEAS
TALLQQIETI IKLIRSKGVG IFFCTQNPMD VPPSVLGQLG MKVQHALRAF TANDRKAIKQ
TAENYPLSEF YKTDDLLTQI GIGEALFTCL NEKGQPTPLA ATMLVSPRSR MDVLTDTEAD
TLVNGSKLVK KYNREIDSES AYEILTAKLQ EAAEKTAEEK QEKPAAKGGR QKEEKSVLET
VLTSSAARQV GRTAANIITR SLLGALGLGG KSSKKSSSWF
|
|---|
| |