| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1214 |
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| Symbol | |
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| ID | 8357330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1446490 |
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| End bp | 1452666 |
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| Gene Length | 6177 bp |
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| Protein Length | 2058 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963370 |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_003120913 |
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| Protein GI | 256420260 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000105563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCGTTTAA TCGGAATTGC TTTTATTTTA TTAATCCTAA GCTGTACAAC CGCTATGGCA
CAGTTCAATT ATGACTCGCA CTGGAAGAAG GTAAAAGAGT TAAATGACAA GAATCTATTC
AAATCGGCCC TACAGGAACT GGACGCCATT GCTGAAAATG CCTCAAAACA ACAGCATGAA
TCCCAGTTAC TTAAAACGTA CATCTACAGA ATCAGGTATG TAGCTGAGGT AGAAGACGGT
ATCCCCGAAA ATGGACAGGT AGCCCGCTGG AAAACCCAGT CGTTTTCCCC GGCTTCCCGC
GCAATACTGA AAAGTATACA GGCGGAATCC CTGCTGAGAT ACCTGCAGAA TAACAGGTAT
GAATTGTACA ACCGCACCGA CGTACAGGGC GATACCTCCA TGGATGTATC CACCTGGAGC
GAAGCCCGTC TTCATCGTGA AATAGCATCA GCCTATGCAG CATCCCTGAA GGATGTTGAA
CTGCTGAAAA AAACAGATAT CAGCCAATAC AATGATATCA TAAAAGAAGG GGTAGGCAAT
ACACGTAAAC TGCGTCCTAC CTTGTATGAC CTGCTTGCAC ACCGTGCGCT GGAGTATTAC
AAATCAGGAG AAAGCCTGGT GACCAGTCCG GAAAATCAAT TCGAAGTGAC AGATCCTGCT
GCATTTGCCC CGGCAGCTGT TTTTATGCAA CATGCATTCA CTACGACCGA TACGGTTTCC
CTTCAATATA AAGCGCTCCT GTTATTACAG GATCTGATGC GTCTGCACGC GAAAGAAAAA
ACATCACTGC TGAACCTGGA CCTGGAAAGA ACAGCCTATG TGAACCAGGT ATCTGTAATG
CCTGAAAAAG ATGCAGCCTA CCTGGCTTTG CTGAAATCAC AGGAACAGGC TTATGCAGGT
GAGAAGGAAG TAACGCAGGT GCTCGCACAG CTTGCGAGTT ATTACTATAC ACAAAGCAAT
CAGAAAGATG CTGCGAATAT CGATGGAATG ACCCCGTCTG AAGCATCTAA GAAAGCCAGA
GAATTGTGTG AAAAAGGTGT TAAACTGGCG CCGGGATCAA TGGGTAGCGC CAGTTGCGGC
GACCTGCTGG CAAATATCAG CCGCAAACAA TTGCAACTGC AAACGGAACT GGTAAACCTC
CCCGATCAGC CTTTCCGTAC CCTGGTCACT TACCGTAATA CTGATAAGAT CTATCTGAGA
GCAGTACGTA TCGATGAAGA TTTCCGTGCT GCATTGCGCG CTGCGCAGAG CGATTATCGT
GATACAACAA ACCGTTACTG GAGGCTGATG CTGGAAAAGC AGCCTGTTAA ATCCTGGGAG
CAGGGGTTGA CAGGGGCTGA TGATTACCGT TCACATTCCG CCGAAATCAA AATAGATGCA
TTGCCATTGG GGATGTATAT GATTGTGGCA AGTGTGAAAA AAGAATTCTC TCTGAAGGAT
AATCTGCTGG CAGTACAGTT TGTACATGTG TCTAACATCA GTTACATACT GCGTGAGTAT
AACGAAAGTG ATATCACTAA TAAATATTAC GCGCTCCATC GTCAGACGGG TCAGCCTTTA
CCTGGTACCA CATTAAAAAT ATGGTCGCAG AAAAATACAG GAAGTAAGGA AAAAATGACA
CTGTCTCAGA CATACACCGC AGGTAAGGAT GGCTCAATAG ATGTGAAGTG GGATAATAAC
CGTGAGTATG TTAGAATGGA ATGGGTCAAT GGGAATGACG ACCTGTTTAT CGACGAACAC
AAATACGTAT ATAGTTATAA ATACCAGCAG GAGTCCGATG AAATGAAGGA TAAGCATAGC
AGCTTCCTGT TTACCGACAG GGCTATTTAT CGTCCGGGAC AAACGCTTTA TTTCAAAGGA
ATCGTATTAG CAAAGAAAGA GAAAGGCAGT CGTGTGGTAA CTGACCTGCA TACCACTGTA
CAGTTGTATG ATGTAAACGG AGAACTGGTA GACAGTATCA AAGTGACCAC CGGTGAATTT
GGTACTTACG CTGGTAAATT CACACTGCCA ACAGGCCGTC TGAATGGTGA ATTCCATATC
CAGGAACCAG GCGGGGAAGG GTATACTACC TTTAACGTAG AAGAATACAA ACGTCCTAAA
TTCTATGTAG AATTTGAGCC GGTACGTGGT ACTTACCGTG TGAACGATTC CGTAAAAGTA
ACGGCAAAAG CATTGGCTTA TGCGGGTAAT AATATCGATG GTGCAAAGGT AGAATACAGG
ATCGTGAGAA GAGCACGTTT CCCTTATCCC TGGATGATGT GGAGAATGCC TTACCAGAGC
GCTTCCCATG AGATTGCACA TGGAGAAACA AAGACAGGTG CAGATGGTAC ATTCAACATA
TCCTTTGCCG CATTACCTGA TCTGAAAATA CCAGCGTCGT TGAAGCCGAT CTTCACGTAT
GAAGTATCAG CAACAGTAAC AGATCTCAAC GGAGAAACAC ATAGCGGTGA TCAGACCGTG
AATGCAGGTT ATCAGGCATT GGAAGTGAGG ATCAATCTGG CAGATAGGGT ACAGGCGAAA
GACCTGGATT CTGTCAGCAT CGTTACACAG AACCTGAATG GCAATTTCGA ATCAGCGGAT
GTGGCGGTGA CTGTTAGTCC GGTGAAACCT TCTGCACGTC TGCTGAGAAG CAGGTACTGG
GATAAACCGG ATCAGTTTAT CATCCCGCAG GCGGAATATG AAAAACTGTT CCCGCACGAT
ATCTACAGAG ATGAAAACGA GCAGGAAAGC TGGACAAGAG AAAATGCAGT GCTGACGCAA
TCTGCTACAA CCAGTGCACA ATCAAGAGTG GCATTAGGTA AGCAGAAATT AGCTGCCGGC
TGGTACGAAC TGAAAGTGAG TACAAAAGAT AAGTATGGTG AAGAAGTAAC ACAGAAACAG
GTATTTGAAG TGATCGACCT GGAGGCGAAG AAACCTTCCT ATCCTGTGTA TGTATGGAAA
TACAGCGATA TTAAAAGTAT CGAACCAGGA GAAAAAAGAC AGCTGCGTAT CGGTTCCTCT
GCAAAAGATG TACATGTATT ACAGTTGTCA CAACATCCTG ATAAGAAAGA ACTGTTCAGC
AGCTTTGATA TCAATGGCAG CATTGAAAAC AAAGACTATA CTGCACAGGA AAGCGACAGA
GGAAACGTGG TATTACAGTA TGCGTTTGTA AAAGATAACA GACTGTATAC CGTTGCAGAA
ACGGTGAGTG TGCCATGGAC CAACAAAGAC CTGGATATTA CGATCGCATC ACATCGCGAT
AAACTGCAAC CAGGTGAGAA AGAGAAATGG CAGGTACAGA TAAAAGGGTA TAAAGGCGAA
CGGGTCGCTG CAGAAATGCT GGCCTCCATG TATGATGCAT CACTGGATGA ATTCCGTATG
CAGAACTGGA TGGCGCCATC CCTGTATCCT TACCTGGATG CATTCAGGTA CTGGACAGGA
GATAACTTCA AAGCAGCCCG TGCTATACAG CGTGATGATA TCAGAGATAG AAGAATTCCA
CCGGCTACGC CATTCTCTTA TGATGACATT AATTGGTTTG ACTGGTATTT ATCAGGTGCA
TATGTACTGT TGCAGGAAAA AAATGCAACA CAGCAGGAAA TAAGCATAGT AGGGTATGAG
CAGGAGAGAA GAAGAATGAT GATGAAGAGG AGTGTAACGC TTGCTGGTGG AATGAGAGCG
GAAGCTGCTA TGGCAGTACC TGCTCCGGCA GCGCCGGCGA AAGAGATGGA AGTAGCTGGT
AATGGGTTTG CTGCCGATCA GGCGGCGCTA GCACCGGGAG CACTCAATGA ATCTGTAGTA
GTTGGATATG GAACAAAAGC TGCTAAAGAA GCAGAGACAG CGAAAGTCCA ACCACGTAAA
AACTTCAACG AAACAGCCTT CTTCCTGCCT GATCTGCGTA CAGACAAAGA TGGTAATATC
ACGTTTGAAT TCACTGTTCC GGAAGCATTA ACACGCTGGA AATTCCTGTC ACTGGCGCAT
ACAAAAGATG CCGCCTTTGG TACTGCTGAA ACAAGCATCG TAACACAGAA GCCACTGATG
GTACAGCCGA ATGCACCGCG TTTCATGCGT GAAGGAGATA AGATCGAATT CTCTGCGAAG
ATCAGCAACC TGGCTGATAG CTCCTTACAT GGTGAAGCAA GACTGGAACT GCTGGATGCA
ACGACCATGC AACCGGTAGA TGGCTGGTTC CAGAACATAT TCCCTACACA ACATTTCACT
GTTGAGAAAG GACAAAGCAC CGCTGTAAAC TTTCCGGTAC AGATACCATT CAACTTTAAC
AGTTCACTGG TATACCGTGT AGTTGCACAG GCAGGTAAAT ACAGCGATGG TGAAGAAAAT
GCATTACCGG TACTGACGAA TACCATGCTG GTAACAGAAA CATTACCACT CTCTATGCGT
GGCGACGGTA CGCGCAACTT CACCATGCCT AAGCTGCTGA AAAGCGGAGA ATCTGAGACT
TTACAGCAAC ATGCCTTTAC TTTGGAGTTT ACTTCAAATC CTGCATGGTA TGCTGTACAG
GCACTGCCTT ACCTGATGGA ATATCCTTAT GAATGTTCTG AACAGATCTT TAACAGGTAC
TATGCAAATA CGCTTGCTTC GCATATCGCG AATACATTGC CAGGTGTAAA AAGTATGTTT
GAAAAATGGC GCACAACAGA CACTGCTGCA TTGCAGAGTA ACCTGCAGAA AAATGAAGAA
CTGAAATCAG TATTGTTGCA GGAAACACCA TGGGTACTGG AAGCGAAAAA TGAAGCAGAG
CAGAAGAGAC GTATTGCATT GCTGTTTGAT CTGCAACGTA TGAGCAGCGA GCAACACAGA
GCGATCGAAC AGTTAAAGGA ACGTCAGCTG AACAGCGGAG CATTCCCATG GTTCAACGGC
ATGTGGGAAG ACCGTTATAT CACACAATAT ATCCTTGCCG GTTTAGGCCG TCTGCGTGAA
TTAGACGCAT TGGGACAGAA AGAACTGGAA GATGCAGATG ATATCCTTTC CAAAGGTATC
CACTATGCAG ATAAAGCAAC CGATGATACT TACCACAGGC TGAAACAGCT GAAGGCAGAT
ATGAATGCAC AGCAGATCGG TTATATCGAA ACACATTATC TGTATACCCG TAGTCTGCTG
AAAGATCAGC AACCCCTTCC TGCTGAATTC AGAGAGTCTT ATCAGTATTA TATCACACAG
GCGAAGAAAT ACTGGACGAA GATGGGTATC TATCAACAGG GAATGCTCGC ATTTGTATTC
AACAGAAGCG GAGATAATAA AACAGCGACA GATATCGTAC GTTCCCTGAA AGAACGTGCG
ATTAATAATC CTGAAACTGG TATGACCTGG AAGGATCTGC GTGGTGGTTA CTGGTGGTAT
GAAGCACCGG TTGAAACACA GGCGATGCTG ATCGCTGCCT TTAAAGAAGT GGGCAATGAT
TCAGTTGCAG TCGGTGATAT GAAAACCTGG TTGTTGAAAA ACAAACAGAC GAATAGCTGG
AATACGACGA AAGCAACAGC TGATGCATGT TATGCCATGT TGCTGGGTGG CAGCAACTGG
CTGGACGCAA CACCGGAAGT AACGATCAAA GCGGGTAATA CGACTGTTAG CAGTACGACA
GAAAAAACAG AAGCCGGTAC GGGGTACTTC AAAAAACAAC TGAACACAAC TGAGGTAAAA
CCTGCTATGG GCAACATCGC TGTAACTGTG AAAGGCAGCA AAGGACAGCC TTCATGGGGC
GCCGCTTACT GGCAGTATTT TGAGCAGCTG GATAAGATCA CCGGTGCTGA AACACCGCTG
AAACTGGAGA AACAGTTATT CATCCATAAG AATACTGCGA GCGGTCCTGT GCTGACAGCG
ATTGAAGATG GCAATAGTCT GAAAGTGGGC AACAAAGTAA AAGTGCGTGT GGTAATGCGT
GTTGACCGTG ACATGGAATA CGTACACCTG AAAGATATGC GTGCCGCCTG CTTTGAACCT
GAAAACGTCA TCAGTGACAG TAAATGGCAG AATGGTGTGA GCTATTACGA AAGCACGAAA
GATGCAAGTA CTAATTTCTT CTTTAGCAGT TTGCCAAAAG GTACCTATGT GTTTGAATAC
ACCCTGTTTG TAACACACCA GGGTAATTTC AGCAATGGTA TCAGCACTGC ACAGTGTATG
TATGCGCCTG AGTTCAGCGC ACACAGTGAA GGTATCAGAG TGAAAGTGAC CGAGTAG
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| Protein sequence | MRLIGIAFIL LILSCTTAMA QFNYDSHWKK VKELNDKNLF KSALQELDAI AENASKQQHE
SQLLKTYIYR IRYVAEVEDG IPENGQVARW KTQSFSPASR AILKSIQAES LLRYLQNNRY
ELYNRTDVQG DTSMDVSTWS EARLHREIAS AYAASLKDVE LLKKTDISQY NDIIKEGVGN
TRKLRPTLYD LLAHRALEYY KSGESLVTSP ENQFEVTDPA AFAPAAVFMQ HAFTTTDTVS
LQYKALLLLQ DLMRLHAKEK TSLLNLDLER TAYVNQVSVM PEKDAAYLAL LKSQEQAYAG
EKEVTQVLAQ LASYYYTQSN QKDAANIDGM TPSEASKKAR ELCEKGVKLA PGSMGSASCG
DLLANISRKQ LQLQTELVNL PDQPFRTLVT YRNTDKIYLR AVRIDEDFRA ALRAAQSDYR
DTTNRYWRLM LEKQPVKSWE QGLTGADDYR SHSAEIKIDA LPLGMYMIVA SVKKEFSLKD
NLLAVQFVHV SNISYILREY NESDITNKYY ALHRQTGQPL PGTTLKIWSQ KNTGSKEKMT
LSQTYTAGKD GSIDVKWDNN REYVRMEWVN GNDDLFIDEH KYVYSYKYQQ ESDEMKDKHS
SFLFTDRAIY RPGQTLYFKG IVLAKKEKGS RVVTDLHTTV QLYDVNGELV DSIKVTTGEF
GTYAGKFTLP TGRLNGEFHI QEPGGEGYTT FNVEEYKRPK FYVEFEPVRG TYRVNDSVKV
TAKALAYAGN NIDGAKVEYR IVRRARFPYP WMMWRMPYQS ASHEIAHGET KTGADGTFNI
SFAALPDLKI PASLKPIFTY EVSATVTDLN GETHSGDQTV NAGYQALEVR INLADRVQAK
DLDSVSIVTQ NLNGNFESAD VAVTVSPVKP SARLLRSRYW DKPDQFIIPQ AEYEKLFPHD
IYRDENEQES WTRENAVLTQ SATTSAQSRV ALGKQKLAAG WYELKVSTKD KYGEEVTQKQ
VFEVIDLEAK KPSYPVYVWK YSDIKSIEPG EKRQLRIGSS AKDVHVLQLS QHPDKKELFS
SFDINGSIEN KDYTAQESDR GNVVLQYAFV KDNRLYTVAE TVSVPWTNKD LDITIASHRD
KLQPGEKEKW QVQIKGYKGE RVAAEMLASM YDASLDEFRM QNWMAPSLYP YLDAFRYWTG
DNFKAARAIQ RDDIRDRRIP PATPFSYDDI NWFDWYLSGA YVLLQEKNAT QQEISIVGYE
QERRRMMMKR SVTLAGGMRA EAAMAVPAPA APAKEMEVAG NGFAADQAAL APGALNESVV
VGYGTKAAKE AETAKVQPRK NFNETAFFLP DLRTDKDGNI TFEFTVPEAL TRWKFLSLAH
TKDAAFGTAE TSIVTQKPLM VQPNAPRFMR EGDKIEFSAK ISNLADSSLH GEARLELLDA
TTMQPVDGWF QNIFPTQHFT VEKGQSTAVN FPVQIPFNFN SSLVYRVVAQ AGKYSDGEEN
ALPVLTNTML VTETLPLSMR GDGTRNFTMP KLLKSGESET LQQHAFTLEF TSNPAWYAVQ
ALPYLMEYPY ECSEQIFNRY YANTLASHIA NTLPGVKSMF EKWRTTDTAA LQSNLQKNEE
LKSVLLQETP WVLEAKNEAE QKRRIALLFD LQRMSSEQHR AIEQLKERQL NSGAFPWFNG
MWEDRYITQY ILAGLGRLRE LDALGQKELE DADDILSKGI HYADKATDDT YHRLKQLKAD
MNAQQIGYIE THYLYTRSLL KDQQPLPAEF RESYQYYITQ AKKYWTKMGI YQQGMLAFVF
NRSGDNKTAT DIVRSLKERA INNPETGMTW KDLRGGYWWY EAPVETQAML IAAFKEVGND
SVAVGDMKTW LLKNKQTNSW NTTKATADAC YAMLLGGSNW LDATPEVTIK AGNTTVSSTT
EKTEAGTGYF KKQLNTTEVK PAMGNIAVTV KGSKGQPSWG AAYWQYFEQL DKITGAETPL
KLEKQLFIHK NTASGPVLTA IEDGNSLKVG NKVKVRVVMR VDRDMEYVHL KDMRAACFEP
ENVISDSKWQ NGVSYYESTK DASTNFFFSS LPKGTYVFEY TLFVTHQGNF SNGISTAQCM
YAPEFSAHSE GIRVKVTE
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