Gene Cpin_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1188 
Symbol 
ID8357304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1414193 
End bp1415665 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content48% 
IMG OID644963344 
ProductPeptidase M23 
Protein accessionYP_003120887 
Protein GI256420234 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATC TGAAGAAGTT TTTCCCGTTT GTATTGATCT TAGGTTTATT ACCGGCCTTG 
CTGCATGCAC AGGCTCCCCA ATTGTCGCGG GAAGAACTCG AGCATAGAAA AAAAGAACTG
CAACGTGAGA TCGATGAAGC GAATGAAGCG CTGAAGAATA CAAAGAAATC TACCCGTGAA
AGTGTCAGCC AGTTAAGGGC CCTGCGCGAT AAAATCACTT TACGTACCCG TCTTATCAAT
AACATCAACG AAGAGATCAA CTTCATCAAT GGCGATATTA ACTCTGCCTA CAGGGATATT
AAAACCCTGG AGAAAGACCT GGATACGCTG AAGTCACAAT ATGCACAGCT GGTCGTATAT
GCGTATAAGA ACCGCAGTAC TTATGACATG CTGAATTTCA TCTTCTCGGC TGAGACTTTC
AATGATGCGA TCAAGCGATA CCAATACCTG AAACAATACC GTGATTACCG GCGCAGACAG
GCCGACAATA TCCTGGAAAC CAGGGTCTTG CTGAGCAAGA AGATTGAGAG TCTGCAGGAA
CAGAAAGAAA AACGTTCCGG CACCCTGAAA GTGGAGCAGG AACAGCGTAC AATCCTTGAA
ACGGATAAGA AGGAGAAAGA TAAGGTATTG ACCAATCTGA AGGGCCGTGA GAAAGAGTTA
ATGACCGACA TCACCAAGAA CAAAAAAGAC GCGCAGAAAG TACAGGCTGC TATTCAGGCG
GTTATCCGTC GTGAGATAGA AATTGCCCGC AGACAGGCAG AAGAGGAAGC TGCCGCCAAG
CGTAAAGCTG CTGCTGACGA GAAACGCAGA AAAGAAGAAG CTGCCAGAAA AGCTGCTGCT
CTTGCTGCTG CAAATGCCGC TGCTGCAAAA GCCGCCGCCG CTGCCCAGAA TACAAATAAT
AACAACGCTG TCGCGGCCAA CGATAAACCT GATAAACCGG ATCCTAAGCC AGCTGAGCCT
GCGCCGAAAC CACCGGTTGC TACACCTGCT CCTGAGCCCG AAAAGCCAGT CCGTACAGAA
AACGTCCTGG AAGCAACACC GGAAGCGCTG GCATTGTCAG AAAGCTTTGA AAGCAATCGT
GGTAAACTGC CATGGCCGGT AAGTTCCGGT CATATCATAG GTCACTTCGG TCGTCAGCAG
CACGCGGTAA TAGAAAGGAT CACGGTAGAG AATGATGGTG TAATTATCGG AACCGGCAAA
GGCGCTCCTG TAAAAGCGAT CTTCCAGGGT GAAGTGAGAA CGGTAGCTGT GATTCCGGGT
GGTGGTTCCC TTGTGATCAT CCGACATGGC CAGTACTTTA CCAACTATGC CCGTTTGCAG
AGTGTAAATG TAAGAACAGG TGACAGGGTA AGCACCGGTC AGGTGATCGG TACAGCGGGT
ACCAATGAAC TGGAGAACCT GGGTGAGGTT GAGCTGCAGA TCTACAGAGG TATACAGAAA
CAGAACCCTG AGTTCTGGAT CAGAAAGAAA TAA
 
Protein sequence
MLNLKKFFPF VLILGLLPAL LHAQAPQLSR EELEHRKKEL QREIDEANEA LKNTKKSTRE 
SVSQLRALRD KITLRTRLIN NINEEINFIN GDINSAYRDI KTLEKDLDTL KSQYAQLVVY
AYKNRSTYDM LNFIFSAETF NDAIKRYQYL KQYRDYRRRQ ADNILETRVL LSKKIESLQE
QKEKRSGTLK VEQEQRTILE TDKKEKDKVL TNLKGREKEL MTDITKNKKD AQKVQAAIQA
VIRREIEIAR RQAEEEAAAK RKAAADEKRR KEEAARKAAA LAAANAAAAK AAAAAQNTNN
NNAVAANDKP DKPDPKPAEP APKPPVATPA PEPEKPVRTE NVLEATPEAL ALSESFESNR
GKLPWPVSSG HIIGHFGRQQ HAVIERITVE NDGVIIGTGK GAPVKAIFQG EVRTVAVIPG
GGSLVIIRHG QYFTNYARLQ SVNVRTGDRV STGQVIGTAG TNELENLGEV ELQIYRGIQK
QNPEFWIRKK