| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1150 |
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| Symbol | |
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| ID | 8357266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1374704 |
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| End bp | 1375375 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963306 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003120849 |
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| Protein GI | 256420196 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.196172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGCTG GTTACATAAC AGCATTTTCA GGTACTGCCA GCACTTTTGT GAGCAGGAAT
AAGGACAAAA CCTATTTTTG CACTATGCCC GAAAATGCAG AACTACAGCA ATTACTAATG
GAGAATGAAG ATGCCTTTAT GGAAGCGCTC TTCAGGACCT ACTTTTCATT TGTCTGCAAG
ACTATCTACC GTATTGTCCA AAGCAATGCG ACAGCGGAAG ACCTTGCACA GGATGTGTTC
ATTAAGATCT GGAACCGGCG CGCAGAGCTC CACCAGGTAT ATTTTAAAGC ATATTTGCAC
AGAGCAGCTA TCAATATGGC ACTGGATTAT CTTGATAAAA ATAAACGCAG AGGTGTACAT
ATGCCCATGG AGGAATATAT GGAACCTGTA CAGGCAGCAC CTGCCGGTCA GAGCCTCCAT
CAAACCACCC GGCATATACA GCAGGCCATT GATAAACTGC CCGAAAAATG CAGAGAAATC
TTTATCCTCA GCCGTTATGA AGAACTATCC TACCGGGAGA TCGCCACTAC GCTGAATATA
TCTGTAAAGA CCGTCGAAAA CCAGATGATG ACAGCGCTTA AAAAACTACG GGTATCCCTC
CAGGACTATT TACAGGTATT CATTCTGTTT CTGGCAGGCA GCGCTATTTA TCCTTTACTT
TTACAATTTT AA
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| Protein sequence | MQAGYITAFS GTASTFVSRN KDKTYFCTMP ENAELQQLLM ENEDAFMEAL FRTYFSFVCK
TIYRIVQSNA TAEDLAQDVF IKIWNRRAEL HQVYFKAYLH RAAINMALDY LDKNKRRGVH
MPMEEYMEPV QAAPAGQSLH QTTRHIQQAI DKLPEKCREI FILSRYEELS YREIATTLNI
SVKTVENQMM TALKKLRVSL QDYLQVFILF LAGSAIYPLL LQF
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