| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1117 |
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| Symbol | |
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| ID | 8357232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1336011 |
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| End bp | 1336679 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963272 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_003120816 |
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| Protein GI | 256420163 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.377836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGAA AAAACAGTCT GGCCGACGAA GTAGCCCAGC GCTTACAGGA ACAGATCTCA
CTTGGCACTT ATAAACCTGG CGAAAAATTG CCCACTGAAC CTGCACTGAT GCAGACCTTT
GGTGTAGGTC GTTCCTCCAT CCGGGAAGCG GTACGCATCC TGTCCAACAG CGGTGTTCTC
CGCGTACAGC AGGGACTGGG CACCTTTGTG GAAGCCAGCA CTGGTATCGA AGAACCACTG
CCCCAGCGTT TAAAAAGAGC TACTGCCGAC GACCTCGACG AAGTACGTCT GCTCCTGGAA
ATGAAAATTG CCCAGAAAGC AGCACTGAAC AGAACAGCTG AAGACCTGGA AAAAATGGAA
TCCTGGTTAC GTCAACGGAA AGAAGCAGCC GCTATCGATG ATACAGCGGC CTCCATAGAG
GCGGATATCA ATTTCCATAT TTCCATTGCG GAAGCCTCTA ATAACAGCAT TCTGACTGAT
CTGTATAAAA CAGTCGCACA TCACCTGAAA AATCACTTTC TCGCACAATT CAAAAATGCG
GAGACCTTCA GAGAAACCCA GCAGCTGCAT AAAAATCTGC TGAACAGCAT CAGTGTTCAA
GACCCGCAAA AGGCATGGCA CTGGGCACAA CGCATTGCAC AACATAACAA CGAAGAGCCA
ACAAAGTAA
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| Protein sequence | MIRKNSLADE VAQRLQEQIS LGTYKPGEKL PTEPALMQTF GVGRSSIREA VRILSNSGVL
RVQQGLGTFV EASTGIEEPL PQRLKRATAD DLDEVRLLLE MKIAQKAALN RTAEDLEKME
SWLRQRKEAA AIDDTAASIE ADINFHISIA EASNNSILTD LYKTVAHHLK NHFLAQFKNA
ETFRETQQLH KNLLNSISVQ DPQKAWHWAQ RIAQHNNEEP TK
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