| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1032 |
|---|
| Symbol | |
|---|
| ID | 8357146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1237049 |
|---|
| End bp | 1237402 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644963186 |
|---|
| Product | alkylhydroperoxidase like protein, AhpD family |
|---|
| Protein accession | YP_003120731 |
|---|
| Protein GI | 256420078 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACG AGATACAAGC TTTTAATGAT TACCGCGCCA AAATGAACGA GGTAATCCTG
GGAAAACAGA ATAAGGTCAT TAACCGTTTA TTTAACCTTG ATACAAATAC TTACGCTGAG
GGCGCGTTGA GCACCAAAGT GAAAGAAATG CTGGGATTGG TTTCATCAAT GGTGCTCCGT
TGCGATGACT GTATCAAATA TCACCTGGGA AAATGCCACG AACAGGGCAT TACTACAGAA
GAAATGTATG AGATCTTTGC CGTAGCTAAC ATTGTTGGCG GTACTATAGT GATACCACAC
ACCAGAAGAG CAGCCGAATA CTGGGAAGCA TTACAGCAAC AGGAACAGGC ATAA
|
|---|
| Protein sequence | MADEIQAFND YRAKMNEVIL GKQNKVINRL FNLDTNTYAE GALSTKVKEM LGLVSSMVLR
CDDCIKYHLG KCHEQGITTE EMYEIFAVAN IVGGTIVIPH TRRAAEYWEA LQQQEQA
|
|---|
| |