| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1021 |
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| Symbol | |
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| ID | 8357135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1224153 |
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| End bp | 1226504 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963175 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003120720 |
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| Protein GI | 256420067 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.751613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA ATTATTTAGA TGAACTGAAC GAGCAGCAAC GGCTGGCAGT AGCGCACATT
AATGGTCCGC TAATGATCGT GGCAGGCGCC GGCTCCGGTA AAACGAAAGT GTTGACCACC
CGTATCGCTC ACCTCATGCG TAACGGGGTA GACGCGTTTA ATATCCTTTC GCTGACATTT
ACAAATAAGG CAGCCCGTGA AATGAAGGAA CGTGTGGAAA AGATCCTCGG CGGTACAGAA
GCACGTAACC TCTACATCGG CACCTTCCAC TCCGTGTTTG CCAGACTGCT CAGAGCAGAA
GCACACCGGC TCGGTTACCC CAACGACTTT ACCATCTACG ATTCTGACGA TGCGAAAAGT
GTGCTTAAAA CCATCATAAA CGAGCAGAAT CTGGACGATA AGCACTACAA GCCTAATTTG
GTATATAACC GCATTTCTGC GGCTAAAAAC AGCCTTATGG GCCCTGAAGA GTATCAGCAT
GACTATGCGG TACAGCAGGA AGATATGCGC GCTAACAGGC CGATGACCGG TAAGCTGTAC
GATATGTACG CCAAACGCTG TTTTAAGAAC GGCGCCATGG ACTTTGACGA CCTGCTCTTC
AAAATGTACC AGCTGCTGAA AAGCTTCCCG GAAGTACTGC ACAAATACCA GCATAAGTTC
AAATATATCA TGATCGATGA GTACCAGGAT ACCAACCCGG CTCAGTACGA GATCATCAAA
CTACTGGGCG CTGCGCATGA AAACATCTGC GTGGTAGGTG ACGATGCACA GAGTATCTAT
TCCTTCCGCG GTGCCACCAT ACAGAACATC CTCCAGTTTG AAAAAGACTA TGATGATGCG
AAAGTGGTAA AACTGGAGCA GAACTACCGT TCTACCAAGT CCATCCTTAA CGTAGCCAAC
GAGGTGATTG CGAATAATAA GGGACAGATC GAAAAGAACC TCTGGACAGA TAACGCAGAC
GGTGAAAAGA TCAAGCTGGT ACGTACCATG ACGGATAATG AGGAAGGTAA GTTCGTAGCA
GATACCATTG CAGAGCAAAA GCTCCGCAAT CACTACGCCA ACAGAGACTT CGCCATCCTC
TACCGCACGA ACGCGCAAAG CCGTGCATTT GAGGAAAACC TGCGCCGTAA GGCCATCCCT
TACCGCATCT TCGGTGGCTT GTCCTTCTAT CAGCGTAAAG AAATCAAAGA CTTTATCGCT
TACCTGCGCA TTGTGACCAA TCCACAGGAA GAAGAAAGCC TGAAACGTAT CATCAACTAT
CCTGTACGCG GCATTGGTAA AACAACCGTT GATAAATGCT CCGTGATTGC CAATGACCAG
AATATCACTT TCTGGAATGT ACTGGAAAGA GCGCGTGAAT TCGGATTCAA GAGCGGTACA
CTGGAAGCGA TCGAAGGGTT TGTGATCATG ATCCGCAGTT TCCAGGCAAT GCTGGGTAAA
CATAATGCTT ACGACATTGC TTTACAGGTG GGTAAATCTA CCAATCTCGT AAAGGAACTG
TTCAACGATA AAACAACAGA GGGCCTGGCC CGCTACGAAA ATATCCAGGA GTTGCTGAAC
TCCATCAAGG AATTCACCGA AACGCCTACG GAAGACGGTG AACTGCTGGA AGCAGAAAAA
TCCCTGGGTA GCTATCTGCA GCAGATCACA TTGCTGACAG ATGCCGATAA AGGCAACGAT
GAAGACAGTG ATGTGGTGAA ACTGATGACC ATCCACGCGG CAAAAGGACT GGAATTCCCG
GTAGTATTCT CCGTAGGACT GGAGGAAAAC CTCTTCCCAA GTGGTCTTTC CATCAATTCA
AGAGAAGAAC TGGAGGAAGA GCGCCGTTTG TTCTATGTGG TGATCACCCG TGCGAAATCC
CGTCTGTTCC TGACATACGC CAACAGCCGT TATCGCTTCG GACAGCTGGT GAATAATGAA
TCCAGCCGTT TCCTGGAAGA GATGCCGGAA AAATACATTG ACCGCAGCTA TGCAGGCGGC
AGTGGTGTAA ACCGTAGTCC GATTAACAAC GGCGGCGGTC TATGGGGTAA TAGCGGAGGA
GGCAACATGT TTGACCGTAT GCAGAAGAAA ACGCCGCAGT CCAGTCAGCA ACCTGCTGGT
CCGCGTCCGG CGCCAAAACC GATGCAGACG GCGATGCCAA GCACACACGT TCCTTCTCCT
AACTTCACAC CGGACGATCC GGCTACCATG GAAGCCGGTA TGGAAGTCGA GCACCAGAAA
TTCGGTTTCG GTACCATTAC CACGATGGAC GGCCCCATGA ATAACCGGGT GGCTACCGTC
AACTTCCCGA AAGCAGGCGG TGAAAAGAAG ATCATGCTGA ACTACGCCCG CCTGATGATC
GTAAAAAAAT AA
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| Protein sequence | MKANYLDELN EQQRLAVAHI NGPLMIVAGA GSGKTKVLTT RIAHLMRNGV DAFNILSLTF
TNKAAREMKE RVEKILGGTE ARNLYIGTFH SVFARLLRAE AHRLGYPNDF TIYDSDDAKS
VLKTIINEQN LDDKHYKPNL VYNRISAAKN SLMGPEEYQH DYAVQQEDMR ANRPMTGKLY
DMYAKRCFKN GAMDFDDLLF KMYQLLKSFP EVLHKYQHKF KYIMIDEYQD TNPAQYEIIK
LLGAAHENIC VVGDDAQSIY SFRGATIQNI LQFEKDYDDA KVVKLEQNYR STKSILNVAN
EVIANNKGQI EKNLWTDNAD GEKIKLVRTM TDNEEGKFVA DTIAEQKLRN HYANRDFAIL
YRTNAQSRAF EENLRRKAIP YRIFGGLSFY QRKEIKDFIA YLRIVTNPQE EESLKRIINY
PVRGIGKTTV DKCSVIANDQ NITFWNVLER AREFGFKSGT LEAIEGFVIM IRSFQAMLGK
HNAYDIALQV GKSTNLVKEL FNDKTTEGLA RYENIQELLN SIKEFTETPT EDGELLEAEK
SLGSYLQQIT LLTDADKGND EDSDVVKLMT IHAAKGLEFP VVFSVGLEEN LFPSGLSINS
REELEEERRL FYVVITRAKS RLFLTYANSR YRFGQLVNNE SSRFLEEMPE KYIDRSYAGG
SGVNRSPINN GGGLWGNSGG GNMFDRMQKK TPQSSQQPAG PRPAPKPMQT AMPSTHVPSP
NFTPDDPATM EAGMEVEHQK FGFGTITTMD GPMNNRVATV NFPKAGGEKK IMLNYARLMI
VKK
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