Gene Cpin_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0993 
Symbol 
ID8357107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1194378 
End bp1195031 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID644963147 
Productprotein of unknown function DUF892 
Protein accessionYP_003120692 
Protein GI256420039 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA GAACTCAAAC CAAATCAAAG ACATCCACTC AATCCAGATC TACAGGAAGA 
AGCGCTGCAG GCAACAAATC CGTTACCGGC TCACGTACGG CTCCTAAATC ATCTTCCAGT
TCCCGCTCAA AAAGCAATAA AGGCCAGAAC GAGGATATGC CAAACTCCAA ATTTCATGAA
CTCTTTGTTG ATCAGTTAAA AGACATTTAC TGGGCTGAAA AGAATCTTGT AAAGGCATTG
GGTAAAATGC AGAAAGCGGC TACTTCTGAG GAGCTGGCAG AAGCCATCGC AACTCACCAG
GAGCAGACAC GCGGTCAGGT AGAAAGACTC GAGCAGGTAT TTGAGTCAAT CGGTCAGACA
GCGAAAGCTA AAAAATGTCC TGCTATGGAA GGGCTGATTG CGGAAGGACA GGAAGTGATC
GAGGATACAG AGGAAGATAG CGCTGTACGC GACGCAGGTC TTATTATCTG TTGCCAGAAG
ATCGAGCATT ATGAAATCGC ATCTTATGGT AGTCTGCGTA CACTTGCAGG AAAAATGGGA
CATGAGGAAG CTGTACAGTT ACTGGAACAG ACGCTGAATG AGGAGAAAGA AACAGATGTA
CTGCTTACCC AGCTTGCTGA ATCTTCTGTA AATGAAGAAG CAGCTGCTGA ATAA
 
Protein sequence
MATRTQTKSK TSTQSRSTGR SAAGNKSVTG SRTAPKSSSS SRSKSNKGQN EDMPNSKFHE 
LFVDQLKDIY WAEKNLVKAL GKMQKAATSE ELAEAIATHQ EQTRGQVERL EQVFESIGQT
AKAKKCPAME GLIAEGQEVI EDTEEDSAVR DAGLIICCQK IEHYEIASYG SLRTLAGKMG
HEEAVQLLEQ TLNEEKETDV LLTQLAESSV NEEAAAE