| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0973 |
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| Symbol | |
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| ID | 8357087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1169115 |
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| End bp | 1172444 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644963127 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003120672 |
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| Protein GI | 256420019 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATTC TTTGCCTGTT ACTTCCCTGT ATTCAAGCCG TTGCGCAGAA GAGTACGCAA
CCTGGCAGAA ATGTTACACT CACCAGTAGT CGTATCGCGC TGGGGGATGT TTTCAATGTC
ATTGAAAAAC AAACCGGCGT TTTGCTGTTC TTTGGAGACC TTAATACGAA TCAGACTGTT
GGCGTGAAAT TCGTCGCGAC ACCGGTAGAA GTGGCACTGG GAGAAATGCT GCCGCCGATA
GGACTGACTT ATGAATATGT GAAAGGAAAT AAGGATAAGA TATTTATAAA GTCGATTATG
CCGAGTAAGA AGGATACGGT CATGATGACG AGTATTAGTG GGGTGGTGAC GGATGAAAAA
GGGGAGCCGC TGCCAGGAGC AAGTGTGAGA GTGAAAGGGA CGAATGTAGG GACGGCTACG
GAGCGAAATG GGAGTTTTAC GTTGAGGCGT AATAGTGAGA AAGATGTGTT GCAGGTGAGT
TTTATGGGGT TTACAATGGC GGAGATACCA GTTGGCGGAA AGGCAAATGT GAAGGTGAGG
TTAAGGCAAG AGGAGAATAG TCTGCAGGTG GTCACGGCTT ATGGAACGAC GGAGAAAAGG
GCTGTGACCG GGGCAATGAC CATTGTGAAG GGCGCGGATA TACAGAATTT GCCGAATAGG
TCTTTTGATA AGAGTTTGAT GGGTGTGGTG CCTGGTTTGT TAGTGACACC TGGTACCGGG
CAACCTGGTG GTGGGATAGC TAATTTTGTG TTGAGGGGAA TTGCAACGTC GGCGGATCCG
AGGAATGGGT CGACTGTAAG GAATCCATTG ATATTGATAG ATGGTATTCC TGTTTCGCAG
GAGACGACAC AAATGTCTTT TTCATATGAC TCATATACAA CTTCTATTAA TAATCCCTTG
GCGCAGTTAA ACCCTTCAGA TATTGAGAGT ATATCGGTTC TTAAAGATGC TTCGGCAATT
GCACTATATG GTGCAAAGGC AAGTAATGGG GTGATACTTA TTACCAGTAA GAGGGGAAAG
GCCGGGAAAA CCAGATTTGA ATTCAGACAT CAGACGGATA TTTCTAAAGC TATTTCCAAT
AGACAACGAA CACTTACTCA AGATGAGTAT TTAAAGTTGC TATACGAAAC ATATAAAAAT
ACAGATCCAA TTAAGTGGAC AGATCAAGCC ATAAAAAGCG ACCTTTTTTC AAAATTTTCC
TACCGTGTAA ATGGGAATGA TACAATATTC TATCCTGCTG CTGATTGGAG AAAGGAGCTG
TATAATGATG TGGCACCAAC GATATCAAAT GAGCTGTCCG CATCAGGAGG TAATGATAAT
ACTAACTTTT TCTTAAACTT TGAATATACC AAACAGAACG GTGTTATCAG GGGAACGGGA
TATGATCGGA AATCTGTACG ATTTAATTTT GAAAACCGAC CAACGAAATG GTTGAGGCTC
GGGCTAAACA ATTTCCTTTC ATATAACGTA CAAAATTACG CCGGCTCTGC TGGTGGGGCC
GGCGATATGG ACGCCGCTGC GATAGCATTA ATGTCTCCTT TAAATCCCAT TCGCCTGGAT
AACGGAGACT TTCAACTTAA TTATGCAGTA GGTGGTTCCT CCCAAAATCA GGTAAATCCA
GCAGCTGCAT TAGCATATAA TACAAATAAG AATACAGCAT ATAGAGCTCT TACCAAAGTT
TCGGCCGAAG TCTCTTTTTT AAAAAATTTT AAGATCACCT CCAACCTGGG TGTCGATTTT
ATGTTTTCTG AGGCCAAGGA AAAGGTCGAT ACGCGGCTCT CTGATCCTTT AACACTTTCG
ATTGGTGGTA AAATAGAGGA ACAGGATGTT CGTAGGGCTA ACATAATAAA CACTAATATG
CTGAACTATA ATCAGATTTT CTCAAACATT CATGAGCTGA ATTTGATTGT CGGACAGGAA
GCTCAAATAA TGAACCAAAG GACAATGGCT GTAGCAGTAG GAAACCTGGG TTCATTTTAT
TATGATCAAA TATCAAGTCC GGGTGCAACA ATAATGAGGC AAAGTGGATA TGTTTTAAAG
GAAACATTGC TGTCTTATTT CGCACAATTG AATTATGGAT TTGGGAAAAA GTATTTTCTG
ACAGGTACTA TCAGAAAGGA TGGGTCTTCC AGATTTGGCG CTGATAAGAG ATTTGGTACT
TACTGGTCGA CTGGAATAGG ATGGGTGATG ACGTCAGAAG ATTTCATGAG TACAGTTTCG
CAATATCTCA ACTATCTCAA GATTCGTGGA AGTATTGGAG CCGCCGGAAA CGCCGGTGCT
ATAAATAGAT TTACTCCGTA TGATCAATCT TCTATCGCCA AGTACCAGAA TGCTACAGCA
GTTTATACTT CGACCCCAGG GAATCCGGAC GTAAAATGGG AGAATACGTT AAGCTGGGAT
GCTGGTGTAG AAGGCTCTAT TATAAAAAAC AGGGTATCGT TTACTGCAGA TATATATCAA
CGTAACACAT CTAATCTAAT CTACACAATT AATTTACCGC TGAGTTCAGG ATTTAGCTCA
ATGCTTGGTA ACCTCGGGAA AATGCGCAAT CGAGGAGTTG AAATTTCTTT GTCAACTGAT
GTCATTAAAA CAAAACAATT TACCTGGAAT ATTAATGCGA ACTGGAGTAC AAACCGTAAC
ACGCTGGTGA AGGCGGATGT ACCCCTTGCC GCGACAGTTG TAGGGCCAAC AGCTAATAAA
GAAGGGGAGA GCTTTAACTC CTTTTATGCA ATTAAATGGG CAGGTGTAAA TCCCTCAAGT
GGAAACTCGC AGTGGCTGGA TAGTGTTGGT AAACCTAATG AGGACCCTAA TGCTGCCAAA
AGAGTTATTA TTGGACAAAC ACAACCCAAA GCATTCGGGT CGATTACTTG TAGATTTAAC
TGGAAAGCAT TTGATTTATC ATCAATGTTT TATTATCAAT ATGGTTATTT AATATACGAT
GACAGCCGTT TTGTGAATGA CGGTTATTCT CCTTACAGCA ATCAGGGAGT GAATGCACTA
GATCGTTGGC AAAATCCTGG TGATATTGCG TCTAATCCTA AACGCCTATT GTCAAATGCC
TTAGGAGGGG CGACAATTTA TTCAAGTCGG TTTCTTTTTA GCGGCGATTA TATAAGATTA
CAAAACGTTG TTGTTGGGTA TACATGTCCT GAGAGTATTA CCCAAAAGTT ACGCATAAGT
GGAGCCAGGA TATTTGTGCA AGGGAGCAAT CTGGCTTTAT GGAGTTCTTC TCCGGCACTG
GATCCGGCGA CCGTAAATGT AGCTGGCTTC TCAAGTACCA GTTATCCAAT GCAAAGATCT
ATTTCTGTTG GCCTAAATGC AAAATTCTAA
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| Protein sequence | MGILCLLLPC IQAVAQKSTQ PGRNVTLTSS RIALGDVFNV IEKQTGVLLF FGDLNTNQTV
GVKFVATPVE VALGEMLPPI GLTYEYVKGN KDKIFIKSIM PSKKDTVMMT SISGVVTDEK
GEPLPGASVR VKGTNVGTAT ERNGSFTLRR NSEKDVLQVS FMGFTMAEIP VGGKANVKVR
LRQEENSLQV VTAYGTTEKR AVTGAMTIVK GADIQNLPNR SFDKSLMGVV PGLLVTPGTG
QPGGGIANFV LRGIATSADP RNGSTVRNPL ILIDGIPVSQ ETTQMSFSYD SYTTSINNPL
AQLNPSDIES ISVLKDASAI ALYGAKASNG VILITSKRGK AGKTRFEFRH QTDISKAISN
RQRTLTQDEY LKLLYETYKN TDPIKWTDQA IKSDLFSKFS YRVNGNDTIF YPAADWRKEL
YNDVAPTISN ELSASGGNDN TNFFLNFEYT KQNGVIRGTG YDRKSVRFNF ENRPTKWLRL
GLNNFLSYNV QNYAGSAGGA GDMDAAAIAL MSPLNPIRLD NGDFQLNYAV GGSSQNQVNP
AAALAYNTNK NTAYRALTKV SAEVSFLKNF KITSNLGVDF MFSEAKEKVD TRLSDPLTLS
IGGKIEEQDV RRANIINTNM LNYNQIFSNI HELNLIVGQE AQIMNQRTMA VAVGNLGSFY
YDQISSPGAT IMRQSGYVLK ETLLSYFAQL NYGFGKKYFL TGTIRKDGSS RFGADKRFGT
YWSTGIGWVM TSEDFMSTVS QYLNYLKIRG SIGAAGNAGA INRFTPYDQS SIAKYQNATA
VYTSTPGNPD VKWENTLSWD AGVEGSIIKN RVSFTADIYQ RNTSNLIYTI NLPLSSGFSS
MLGNLGKMRN RGVEISLSTD VIKTKQFTWN INANWSTNRN TLVKADVPLA ATVVGPTANK
EGESFNSFYA IKWAGVNPSS GNSQWLDSVG KPNEDPNAAK RVIIGQTQPK AFGSITCRFN
WKAFDLSSMF YYQYGYLIYD DSRFVNDGYS PYSNQGVNAL DRWQNPGDIA SNPKRLLSNA
LGGATIYSSR FLFSGDYIRL QNVVVGYTCP ESITQKLRIS GARIFVQGSN LALWSSSPAL
DPATVNVAGF SSTSYPMQRS ISVGLNAKF
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