Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0971 |
Symbol | |
ID | 8357085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1166951 |
End bp | 1168099 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963125 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003120670 |
Protein GI | 256420017 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTAG ACAGGGATCA TATTCATCAA CTGATGAATG AAAAAGTGGT GATGGGGGTT ATTAACGAAA CAGATGAGCA ACTCCTTCAA AATGCATTTA AAGAACATCC GGAACTAAAA ACCGAATTCG AACAGCTTCA GCAGGAATAC GCCATTTGGT CCAGTGAACC CGCCATACAA CATCTCGATA GCGAAGCCGA CTTCGCGCTT ATCGAAGATG AACTGAAAAG CAGAAAACGC CGTAAAAGGA ATGGCCGTGC TTTTAGTATG CTGCTCATCG CCGCATCCAT AGCCGCCATC GTTGTTTTTA TATACCCGCT TTTTACCAGC CATCCTGATA GCATAACACC AAGCCAGGAG CTGGCCCTTA ACAAAACAAC ACTGCAACTG CAGTTATCCA ATGGAGAAGT CATCGATCTC TCTGCCCCTA AAGATAGTAT TACCCTCACC GGAGGAACAC AACTGAGGAA TAACAATCAT TCCCTCACCT ACTCCACAAA AGATAATACC AATACCACTG AACAGGTCAA CAAACTATGG GTACCTCCCG GCATGGATTA CCACATCACA CTGTCTGACG GCACCATCGT CTTCCTGAAT AGCGCTACCT CCCTCCAATT CCCCTTCCAT TTCACCGGCA ATACCAGAGA GGTATTTGTT GACGGAGAAG CCTACTTACA GGTCGCAAAA GACCATAACC GGCCATTTAT CCTGCATACC CCCAAAGGTG CCGTACAGGT GCTCGGAACC GCTTTTAACG TGAATACTTA CGACTCCGGA CGTATAAAAG TCTCCCTGGT AGAAGGCGCC GTTTCCTTTG CCAACGCAGA GAAACAAACC ATTCTCAAAC CAGGACAAGC AATTACCTAC CTGGAAAATA AAGGGACAAC GCTGACTGCT TTAAACGAAA ACGAATTACT CTGGATTCAG GGAAGGTATA AACTGGATAA TGCCCCGATG ACTGAAATCA CCAAGGTACT CCCCCGCTGG TACGGTGTAA AAGTTGTCAT CGACAACCCC GCCGTCGCTG AAAAGAAGTT TACAGGCACC ATCCTGAAAG CGGAACCTGT TCAGGAGTTC CTGGACGCTA TAAAGCTGAC CACAGGAGCT GATTCCTACT ACAAAGACGG CGTACTCCAT ATCCGTTAA
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Protein sequence | MELDRDHIHQ LMNEKVVMGV INETDEQLLQ NAFKEHPELK TEFEQLQQEY AIWSSEPAIQ HLDSEADFAL IEDELKSRKR RKRNGRAFSM LLIAASIAAI VVFIYPLFTS HPDSITPSQE LALNKTTLQL QLSNGEVIDL SAPKDSITLT GGTQLRNNNH SLTYSTKDNT NTTEQVNKLW VPPGMDYHIT LSDGTIVFLN SATSLQFPFH FTGNTREVFV DGEAYLQVAK DHNRPFILHT PKGAVQVLGT AFNVNTYDSG RIKVSLVEGA VSFANAEKQT ILKPGQAITY LENKGTTLTA LNENELLWIQ GRYKLDNAPM TEITKVLPRW YGVKVVIDNP AVAEKKFTGT ILKAEPVQEF LDAIKLTTGA DSYYKDGVLH IR
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