| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0954 |
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| Symbol | |
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| ID | 8357068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1138310 |
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| End bp | 1139557 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963108 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003120653 |
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| Protein GI | 256420000 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGAA AAATAGAAAA GAAGTACTGG TCTAAAAAGA GAATCGCCCT TATCAGCGGA
GGCGCTGTAG TAGCGATGTT ACTTCTGTAC AATCTCATAT TTGCCGATCA TCGTTCCAAG
TTGAACGTAG AGAAAGATAA GATCACTATT TCTACCGTCA GCAAAGGCAC CTTTGATCAA
TATATAGCAG TTACCGCTGT TGTGTTGCCT CTTAAAACAA TTCGCCTCGA TGCCATCGTA
GGCGGTTATG TCAGTCAGAA ATACCTGGAG GGGGGTAGCA TGGTTAAAAA GGGCGACAGC
ATTCTGCGCC TGGAAAACCA GAACCTGATG ATGGACTTTG TAAATCATGA AACGGAAATC
TACCGTCTGA TCAACGAACT CCAGAATACC CGCCAGACCC TGAAGCAGAA CCGTTTTACT
ATGCAGCAGA CCGTGGCAAA CCTGGATTTT CAGATCGAAC AGGCCAAAGA CCTGTATGAT
CGTACCAAAC AACTGGTAGA CGAGAAGATC GTTTCCCGGC AGGAGTTTAT AAAAAATAAG
CTTGATTATG AGCGTCTTGT GAAACAGCGC CAGATAGAGG TAGAAAGCCA GCGCTTCCAG
GAGGACAATG CCAAAATACA GATAGATCGC CTTGAGTCAA CTATTCTCCG TACGCAGCGT
AACCTTCAGA TGATGAAGGA TAACCTGAGT AACCTGGTGT TGAGAGCGCC TATCGACGGA
CAATTATCCT CTGTTGACGC CGAAGTAGGG GGAAGCATCA CTGCCGGTCA GAATATTGGT
CAGATCGATG ACCTGGATGG CTTCAAGATG CGTGCGGAAG TGGACGAGCA TTATATCTCC
AGGGTATTCC CGGGTTTGAA ATCCACTTTT GAGTTCAATA ACAAAACCTA TGTATTATCT
ATCATCAAAG TATATCCTGA GGTGAAAAAC GGTCGTTTCA ATGTCGATAT GAAATTCGAA
AAAGAAATGC CGGAAGGGAT CCGTCGCGGA CAATCGTCTC CTATCCGCCT GGAATTAGGT
AAGTCCTCTT CCGCGCTGTT GCTGCCGGTA GGTGGTTTCT TCTCCGACAC CGGTGGTAAC
TGGGTATATG TAGTGGATAA AGCTGGAAAC AGGGCCGTAA AACGGAACAT TTCCCTGGGA
CAGAAAAACC CACAGTATTT TGAAATACTG GAAGGTTTGC AGGAGGGTGA ACAGGTCATT
ACTTCTTCGT ATGAAAATTT CGGAGACAAA GAGGTTTTAG TATTTTAA
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| Protein sequence | MDRKIEKKYW SKKRIALISG GAVVAMLLLY NLIFADHRSK LNVEKDKITI STVSKGTFDQ
YIAVTAVVLP LKTIRLDAIV GGYVSQKYLE GGSMVKKGDS ILRLENQNLM MDFVNHETEI
YRLINELQNT RQTLKQNRFT MQQTVANLDF QIEQAKDLYD RTKQLVDEKI VSRQEFIKNK
LDYERLVKQR QIEVESQRFQ EDNAKIQIDR LESTILRTQR NLQMMKDNLS NLVLRAPIDG
QLSSVDAEVG GSITAGQNIG QIDDLDGFKM RAEVDEHYIS RVFPGLKSTF EFNNKTYVLS
IIKVYPEVKN GRFNVDMKFE KEMPEGIRRG QSSPIRLELG KSSSALLLPV GGFFSDTGGN
WVYVVDKAGN RAVKRNISLG QKNPQYFEIL EGLQEGEQVI TSSYENFGDK EVLVF
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