Gene Cpin_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0921 
Symbol 
ID8357035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1097833 
End bp1098354 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content46% 
IMG OID644963075 
Product5 nucleotidase deoxy cytosolic type C 
Protein accessionYP_003120620 
Protein GI256419967 
COG category[S] Function unknown 
COG ID[COG4502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.911552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAA TTGCAATAGA CATGGATGGC GTTATGGCAG ATACCACGCA ACAGATGATT 
GACTGGTATG CTAAGCGTTA TGGCGTACAG GTAGATAAGG ATGCCTTATA CGGCAAACCT
GAAACCACCG GTTTCCCGCA CGAAAAGGAT ATTATCAGGT CTTTCCTGTT TGAACCAGGT
TTCTTCAGGA CCAAACCGGT GATTAAGGAC AGCCAGGAAG TGATCAGGGC TTTACAGGAC
AAGCATGAGG TATTCATAGT ATCAGCAGCC ATGGAGTTTC CGGCATCATT ACCGGAGAAA
GTAGAGTGGC TGGCGGAATA CTATCCGTTC ATTACATGGC AGAACATTGT TTTCTGCGGA
TCTAAGACGA TCGTACAGGC AGATTATATG ATAGATGATC ATGTTAAGAA CCTGCAGCCG
TTCAAGGGAC AGGGACTGAT GTTCACTGCA CCACATAACG TACATGTTAC TGATTTCAAA
AGGGTGGATA CCTGGCAGGA TGTAGCAGGG CTTTTACTGT AA
 
Protein sequence
MARIAIDMDG VMADTTQQMI DWYAKRYGVQ VDKDALYGKP ETTGFPHEKD IIRSFLFEPG 
FFRTKPVIKD SQEVIRALQD KHEVFIVSAA MEFPASLPEK VEWLAEYYPF ITWQNIVFCG
SKTIVQADYM IDDHVKNLQP FKGQGLMFTA PHNVHVTDFK RVDTWQDVAG LLL