Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0907 |
Symbol | |
ID | 8357021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1081601 |
End bp | 1082404 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963061 |
Product | Beta-lactamase |
Protein accession | YP_003120606 |
Protein GI | 256419953 |
COG category | [V] Defense mechanisms |
COG ID | [COG2602] Beta-lactamase class D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.175545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA CTGGCTGGAT ACTCCTGCTG ATAGCCTTCT TGGCCAATGC CTGCGCACCG AATAACGTTG AAAACGAAAA GAGCTGGGAA AAATACTTCG CCGAATACAA GGTAGAAGGA TGTTTTATGC TGTTCAACAA CAGCCAGGGT ACCTTTAAAG TATATAACCT GGAACGTTCT CAGCAACGCT TCCTGCCCGC CTCTACTTTT AAGATCTTCA ACTCCCTAGT AGGCCTTGAA ACAGGTGTTA TCAAAGATAC TTCCTTCGTT ATTCCCTGGG ATGGCGTAAC ACGCGACATG CCGGAATGGA ACCATGACCT GAGTATGCAA CAGGCCTTCC GCGTATCTGC TGTGCCTTAC TTCCAGGAAG TAGCCCGCCG TATCACCAAA CCAGTAATGC AGCACTGGCT GGATACTGTC AAGTTTGGTA ATATGAAGAT CAGCAAGATC GATACCTTCT GGCTGGATAA CTCTTTACAG ATCTCTCCGG ATGAAGAACT TGGCTTCGTC AAGAAACTGT ATTTCGACCA GCTGCCTTTC CATAAAGTGA CCATGCAGAA CGTCAGACAA GTAATGCTCA TGGAGAAAAA ACCAGAATAT GAACTGAGTT ATAAAACAGG TATGGGTTTC TCCGGACCTA AAACAATCGG CTGGATTACC GGCTGGATTG AAGAGAATGG CCACCCCAGC TTCTTTGTAC TGAACATTGA AACAGAAAAC AAATCGCTGG ATATGCGCAC GGTGCGTATG AACATCCTCA GAAACCTCCT GACAGACGCC GGTTACTTTA AAGGAATGAA ATAG
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Protein sequence | MKQTGWILLL IAFLANACAP NNVENEKSWE KYFAEYKVEG CFMLFNNSQG TFKVYNLERS QQRFLPASTF KIFNSLVGLE TGVIKDTSFV IPWDGVTRDM PEWNHDLSMQ QAFRVSAVPY FQEVARRITK PVMQHWLDTV KFGNMKISKI DTFWLDNSLQ ISPDEELGFV KKLYFDQLPF HKVTMQNVRQ VMLMEKKPEY ELSYKTGMGF SGPKTIGWIT GWIEENGHPS FFVLNIETEN KSLDMRTVRM NILRNLLTDA GYFKGMK
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