| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0896 |
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| Symbol | |
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| ID | 8357010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1069383 |
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| End bp | 1072583 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644963050 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003120595 |
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| Protein GI | 256419942 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.380602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGAG ATCAGTACCA ACAGCATTTC AGGGAAATGT ATGACCGCCT TAACAGGCAG
CAGCGGCAGG CCGTCGACCA GACGGATGGC CCGGTTATGG TCATAGCCGG CCCTGGTACC
GGTAAAACCC AGATCCTCGC CTCCCGTATC GGCAAGATCT TACAGGACAC CGACTATCAG
CCGCAAAACA TTCTATGCCT TACCTATACC GACGCCGGTA CCGTGGCCAT GCGTAAACGG
CTGACCGGCT TTATCGGCCC TGATGCTTAC CGTGTCAATA TTCATACCTT TCATTCCTTC
TGTAATGAAG TCATACAGGA CAATCTCTCC CTGTTTGACA AACATAGCCT GGATCCTGTC
TCCGAACTGG AAAAGATCCA GCTGCTCAAA AAACTCATTG ACGGCTTTAC CAAAGACAAT
CCGCTCAAAC GCTATAGAGG CGATGTGTAC TTTGAAATGA AAAACCTGGC CCAGCTCTTT
TCTACCATGA AAAAAGAAGG CTGGACGGTC GATTATATCA ATGAAGCTAT CACTGCTTAC
ATCGAAAGCC TGCCCTCCCG GGAAGACTTC ATCGCAAAAA AAGCTGCCGG GACTTACGTG
CGGGGGGATG TCCGTACAGA CAGGATCGCC CGCGAGAAAG AAAAAATGAT CCGCTTACAG
GCAGCTGTTG AACAGTTCCC TGTATATACG GCATTCATGC ATACCGCCGG TCGCTATGAC
TTTGACGACA TGATCAACTG GGTGATCGGC GCCTTTGAAG AATACCCTGA TCTCTTAGCT
GACTACCGGG AAAAATACCA ATACATCCTG GTAGACGAAT ACCAGGATAC CAGCGGTACG
CAAAACCGCC TGGTGCAACT GCTTACAGAA GACCAGGAAA GCCCCAACAT CTTTGTCGTA
GGTGATGATG ACCAGTCCAT CTACCGCTTT CAGGGCGCCA GTATTGAGAA TATGGCCCTG
TTCGCAGAGA CCTTTGCGGA CAATCTTCAC ACAATAGTCC TGACCCACAA CTACCGCTCA
GTACAACCCA TCCTTGATGT GGCTATGTCG CTGATCGCTA ATAATGGCAA TTCCCGGTTG
GTCAACCAAC TCCCGGAACT GGACAAACAA CTGATCGCGG CCATACCGGC TGCACAGTCA
CCGGTTCCCG TCATCAGGCG TTATAATACG TCCCGTGATG AAATGACTGA CATCACACAA
CAAATAGCAC GTCTGCTTGA AAAAGGGATA GCGCCAGGCA GAATAGCCGT GATCTACAGG
GAAAATAAAT ATGGGGAAGA ACTGGCCCGT TACTGTCGTC AGCAACAACT GCCTTTCTAC
TCCAAACGCA GCATCAATCT TTTTGAGGTG CCTTTCGCCC GGAAAGTATT GTCCATCCTG
CGCTACCTTG CCTGTGAAGT AGATACGCCC TACAGTGGCG ATGACCTGCT GTTTTCCATT
CTGCACTACG ATTTTTACAA TATTCCGGCA ATAGAAGTAG CCAAGATCAG CATCCGGGCG
GCCGAGAAAG GCTACCGGGA AAAGTCCTCT ATCCGGCAGT ATTTACAGGA ATGGGCGCAT
ACACGCAATC TGACGCTTTT CACCGCTGCA CCGGAACAGG CGCTTGTCGA CTTCTCCGCA
ATGATGGAAA AACTGATACG GGATGCCCAT AATCTGACCC TGCAACAGCT CTTTGCCGCC
GTCATCAATG AATGCGGCGT ATTGTCTTAT GCCATGCAAT CGCCTGAGAA GCCCTGGCTG
ATGAAAGTCC TCCAGGCACT TTTCGACTTC GTCAAAGAAG AAACACATCG CAACCCCGAT
CTGACCATCG CGCCATTCAT GGACATGGTC GACCTGATGC GGCATAACGG TATCACCATT
CCGCTGGTAC AGGTATCGGG AAATGAAACC GGCATTAATC TGCTGACGGC CCACGGGGCA
AAGGGACTGG AATTTGAATA TGTGTTCATT GCCGGCGCCA ATGCATACCT CTGGGAAGAG
AAAGTAAAGA ACGGCAGCGG TTTCTCATTC CCGGATACCC TCTTTACCAC AACCCTCACC
AGTACCGACG AACAGGAACT ACGCCGGCTG TTTTACGTCG CCATCACCCG TGCCGAAAAA
CACCTGTATA TCAGCTATCC GGAATACAGA ACGGATGGCA AACCACTGGA ACCCAGTCTC
TTTGTCACAG AAATACTGGA CCAGCATCAG CTTCCGGTAG AGAAAGTGAT CATCCCCGAA
GAAGTACAGT TCAGGTTTGC AGCACTGGAT TATACACCGG AACTGGCTCC TGAAATCGCC
AAAACGGACC AGCCGCTGAT AGATAACCTG CTGGCAAACT TCGTCATGAA CGTGACAGCC
CTCAACAATT ATCTCGATTG CCCACTGGGC TTCTACTATA AAAACCTGGT CCGCGTACCT
TCCGGTCGTT CCGAAAACAC AGAATTCGGC TCTGCGGTAC ACTATGCGCT GGAAAAGCTC
TTCCTGAAAA TGCAGGAAAG CGGCCGCTAT GAATTCCCTT CCAAAGAAGA ATTCATCCGG
GACTTTACCT GGAGTATGCT GCGCAACCGC GAAAGCTTTA CCCGCGAGTC ATTTGAAAGA
CGCCTGGAAT ATGGACGCGA TATCCTCGAT CACTATTACG ATACCTGGCT GCCACACTGG
AATAAAGTGG TCAGCGTAGA AAGGAATATT CGTAGTGTAG TGGTCAATGG CGTGCCCTTG
AAAGGCAAGA TTGATAAACT GGAATTTGAC GGTAACCTGG TCAATGTAGT CGACTACAAG
ACCGGCGACT ATGAAAAAAC CATCAAAGAA TACCAGAAAT TCGTCCGTCC TGATCAGCAA
CACCCCCATG GCGGCGATTA CTGGCGCCAG GCCGTGTTTT ACAAAATCCT GCTGGACAAT
TACCGCCAGA AGAACTGGCA GGTGGTCAGT ACGGAGTTTG ACTTTATTGA ACCGAATAAG
CAGCAGCACT ATCACCGGGA AAAGGTGGTA ATCACCCCGG AAGACGTACG GCTGGTGACA
GGTCAGATCG TATCTGCCTG GACAAAAATC CAGAATAAGG AGTTTTATAC CGGCTGTGGC
AAAAAAGACT GCGTCTGGTG CAATTTCGTA AAGGACAATA AGTTGCACGT AGCCCTGCAC
GACCTCAGAG ACGAAGACGA ATCAGAAGAC GGCTATCGGC CCGGTCAACT CCTCCGGCAG
CAGCCATTCA CCGATCTTTA A
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| Protein sequence | MSRDQYQQHF REMYDRLNRQ QRQAVDQTDG PVMVIAGPGT GKTQILASRI GKILQDTDYQ
PQNILCLTYT DAGTVAMRKR LTGFIGPDAY RVNIHTFHSF CNEVIQDNLS LFDKHSLDPV
SELEKIQLLK KLIDGFTKDN PLKRYRGDVY FEMKNLAQLF STMKKEGWTV DYINEAITAY
IESLPSREDF IAKKAAGTYV RGDVRTDRIA REKEKMIRLQ AAVEQFPVYT AFMHTAGRYD
FDDMINWVIG AFEEYPDLLA DYREKYQYIL VDEYQDTSGT QNRLVQLLTE DQESPNIFVV
GDDDQSIYRF QGASIENMAL FAETFADNLH TIVLTHNYRS VQPILDVAMS LIANNGNSRL
VNQLPELDKQ LIAAIPAAQS PVPVIRRYNT SRDEMTDITQ QIARLLEKGI APGRIAVIYR
ENKYGEELAR YCRQQQLPFY SKRSINLFEV PFARKVLSIL RYLACEVDTP YSGDDLLFSI
LHYDFYNIPA IEVAKISIRA AEKGYREKSS IRQYLQEWAH TRNLTLFTAA PEQALVDFSA
MMEKLIRDAH NLTLQQLFAA VINECGVLSY AMQSPEKPWL MKVLQALFDF VKEETHRNPD
LTIAPFMDMV DLMRHNGITI PLVQVSGNET GINLLTAHGA KGLEFEYVFI AGANAYLWEE
KVKNGSGFSF PDTLFTTTLT STDEQELRRL FYVAITRAEK HLYISYPEYR TDGKPLEPSL
FVTEILDQHQ LPVEKVIIPE EVQFRFAALD YTPELAPEIA KTDQPLIDNL LANFVMNVTA
LNNYLDCPLG FYYKNLVRVP SGRSENTEFG SAVHYALEKL FLKMQESGRY EFPSKEEFIR
DFTWSMLRNR ESFTRESFER RLEYGRDILD HYYDTWLPHW NKVVSVERNI RSVVVNGVPL
KGKIDKLEFD GNLVNVVDYK TGDYEKTIKE YQKFVRPDQQ HPHGGDYWRQ AVFYKILLDN
YRQKNWQVVS TEFDFIEPNK QQHYHREKVV ITPEDVRLVT GQIVSAWTKI QNKEFYTGCG
KKDCVWCNFV KDNKLHVALH DLRDEDESED GYRPGQLLRQ QPFTDL
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