Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0811 |
Symbol | |
ID | 8356924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 973469 |
End bp | 974440 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962964 |
Product | protein of unknown function DUF323 |
Protein accession | YP_003120510 |
Protein GI | 256419857 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00245375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA GACTATTGGC GTTGTCGCTG GGATCAATGC TTGCTGGTCC GGTGTTCGGA CAGGAGACCG CCTCTCAGCC ATTTGCTGCT TACGAAGAAA AACTGCCAGG AACTACATTC TCTTTTAAAA TGGTGCCTAT TCCCGCAGGA GAAGTAATGC TCGGAAGTCC CACGGGCGAA AAGGGCAGAA CTGCCGACGA AGGACCACAA AAAAAGGTGA AAGTCAATGC ATTCTGGATG AGTGCATTTG AGGTTACCTT TGAGCAGTAT GACGTTTATT CCGATCCGGA AAAAGACAAA ACACCTATTC CGGATGGGAT GACCAGACCG AGTCCTCCAT ACATCGACCT GACCCTTGGG ATGGGTAAAG TAGGCGGCTT TCCTGCTAAC AGTATGAGCC AGTATGGCGC ATTAATGTAC TGTAAATGGC TCTATGCAAA AACCGGCGTA TTTTACCGGC TGCCGACAGA AGCAGAATGG GAGTATGCCT GCAGGGCAGG TGCAACAACC GCTTATCCTT TTGGCAATGA TGCTGCGAAA CTGAAAGAGT ATGCCTGGTA TGCCGGTAAC AGCGATAACA AGTATCATAA AGTGGGAGAA CTAAAACCTA ACGCCTGGGG CTTGTATGAT ATGCTGGGTA ACGTGGCAGA ATGGACCCTG GATCAGTATG ATGAGCAGTA TCTGCAACAT GCAGAAGAGA ACAATCCCTG GATCAGGCCA ACATCCAAAA CACCCCGGAC GATCAAAGGC GGTAACTATC GCGATGAACC GGTGGCTTTA CGCAGTGCCA GCAGATTGAA ATCAGATCCG GCCTGGAACC GCAGAGACCC ACAGATACCG AAAAGTTTCT GGTGGAATGC AGATGCGCCG TTTATCGGAT TCCGCGTAGT GCGTCCGGCG CAGCAACCGA CAAAGGAAGA AGCAGCGCGT TTTTTTGAAG AGGTCGTAGA TCAGTACAAA GGATCAAGAT AA
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Protein sequence | MKNRLLALSL GSMLAGPVFG QETASQPFAA YEEKLPGTTF SFKMVPIPAG EVMLGSPTGE KGRTADEGPQ KKVKVNAFWM SAFEVTFEQY DVYSDPEKDK TPIPDGMTRP SPPYIDLTLG MGKVGGFPAN SMSQYGALMY CKWLYAKTGV FYRLPTEAEW EYACRAGATT AYPFGNDAAK LKEYAWYAGN SDNKYHKVGE LKPNAWGLYD MLGNVAEWTL DQYDEQYLQH AEENNPWIRP TSKTPRTIKG GNYRDEPVAL RSASRLKSDP AWNRRDPQIP KSFWWNADAP FIGFRVVRPA QQPTKEEAAR FFEEVVDQYK GSR
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