Gene Cpin_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0811 
Symbol 
ID8356924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp973469 
End bp974440 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content49% 
IMG OID644962964 
Productprotein of unknown function DUF323 
Protein accessionYP_003120510 
Protein GI256419857 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00245375 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA GACTATTGGC GTTGTCGCTG GGATCAATGC TTGCTGGTCC GGTGTTCGGA 
CAGGAGACCG CCTCTCAGCC ATTTGCTGCT TACGAAGAAA AACTGCCAGG AACTACATTC
TCTTTTAAAA TGGTGCCTAT TCCCGCAGGA GAAGTAATGC TCGGAAGTCC CACGGGCGAA
AAGGGCAGAA CTGCCGACGA AGGACCACAA AAAAAGGTGA AAGTCAATGC ATTCTGGATG
AGTGCATTTG AGGTTACCTT TGAGCAGTAT GACGTTTATT CCGATCCGGA AAAAGACAAA
ACACCTATTC CGGATGGGAT GACCAGACCG AGTCCTCCAT ACATCGACCT GACCCTTGGG
ATGGGTAAAG TAGGCGGCTT TCCTGCTAAC AGTATGAGCC AGTATGGCGC ATTAATGTAC
TGTAAATGGC TCTATGCAAA AACCGGCGTA TTTTACCGGC TGCCGACAGA AGCAGAATGG
GAGTATGCCT GCAGGGCAGG TGCAACAACC GCTTATCCTT TTGGCAATGA TGCTGCGAAA
CTGAAAGAGT ATGCCTGGTA TGCCGGTAAC AGCGATAACA AGTATCATAA AGTGGGAGAA
CTAAAACCTA ACGCCTGGGG CTTGTATGAT ATGCTGGGTA ACGTGGCAGA ATGGACCCTG
GATCAGTATG ATGAGCAGTA TCTGCAACAT GCAGAAGAGA ACAATCCCTG GATCAGGCCA
ACATCCAAAA CACCCCGGAC GATCAAAGGC GGTAACTATC GCGATGAACC GGTGGCTTTA
CGCAGTGCCA GCAGATTGAA ATCAGATCCG GCCTGGAACC GCAGAGACCC ACAGATACCG
AAAAGTTTCT GGTGGAATGC AGATGCGCCG TTTATCGGAT TCCGCGTAGT GCGTCCGGCG
CAGCAACCGA CAAAGGAAGA AGCAGCGCGT TTTTTTGAAG AGGTCGTAGA TCAGTACAAA
GGATCAAGAT AA
 
Protein sequence
MKNRLLALSL GSMLAGPVFG QETASQPFAA YEEKLPGTTF SFKMVPIPAG EVMLGSPTGE 
KGRTADEGPQ KKVKVNAFWM SAFEVTFEQY DVYSDPEKDK TPIPDGMTRP SPPYIDLTLG
MGKVGGFPAN SMSQYGALMY CKWLYAKTGV FYRLPTEAEW EYACRAGATT AYPFGNDAAK
LKEYAWYAGN SDNKYHKVGE LKPNAWGLYD MLGNVAEWTL DQYDEQYLQH AEENNPWIRP
TSKTPRTIKG GNYRDEPVAL RSASRLKSDP AWNRRDPQIP KSFWWNADAP FIGFRVVRPA
QQPTKEEAAR FFEEVVDQYK GSR