Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0806 |
Symbol | |
ID | 8356919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 968964 |
End bp | 969704 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962959 |
Product | protein of unknown function DUF88 |
Protein accession | YP_003120505 |
Protein GI | 256419852 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.806829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA AAGATCTCCG TTTGGCTGTC CTTATCGACG CTGATAATAT TCCTTACAAC AAGGTGAAAG AGATGATGGA AGAGGTGGCC AAGTATGGAA TTCCCACATT TAAGCGCATC TATGGGGACT GGACAAAACC CACGCTGGCT GGCTGGAAAA CAGTGTTGCT CGACAATGCG ATTACCCCGA TACAACAATA CAGTTATACG TCCGGCAAAA ATGCCACCGA CTCTGCGATG ATCATCGATG CGATGGATAT TCTGTATACC GGCAGGGTAG ATGGTTTTTG TCTGATTACG AGCGACAGTG ATTTTACCCG TCTGGCTACG CGTTTGCGGG AGGCCGGGAT GCGGGTATTC GGACTGGGAG AGAAGAAGAC GCCCAGTGCC TTCAGGGCCG CTTGTGATAA GTTCATTTAT CTTGAAATCC TGGTAAGCGA GGTAAAGGAT GCGTCCGTGA AACCGAAAAC CGTAAAGGAG AAGAGTAAGG CTATCAGTAA GGCCGACAAG GAACTGGTGA ATATGCTGGG ATCGAGTATC AATGATATTG CAGATGAAGA TGGCTGGGCT TACCTGGGAG AACTGGGGAA TCTGTTATTG AAGAAACAAC CGGATTTTGA CGCCCGAAAC TATGGGTACA GCAAACTTTT ACAGCTGATC AAAAGCTTTG ATGATTTTGA AATAGACATC AGGGAGAGCG GCCGCAAGAT GGGGAAACTG GTATATGTAA GGGTAAAATA A
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Protein sequence | MENKDLRLAV LIDADNIPYN KVKEMMEEVA KYGIPTFKRI YGDWTKPTLA GWKTVLLDNA ITPIQQYSYT SGKNATDSAM IIDAMDILYT GRVDGFCLIT SDSDFTRLAT RLREAGMRVF GLGEKKTPSA FRAACDKFIY LEILVSEVKD ASVKPKTVKE KSKAISKADK ELVNMLGSSI NDIADEDGWA YLGELGNLLL KKQPDFDARN YGYSKLLQLI KSFDDFEIDI RESGRKMGKL VYVRVK
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