Gene Cpin_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0801 
Symbol 
ID8356914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp964004 
End bp964426 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content49% 
IMG OID644962954 
Producthypothetical protein 
Protein accessionYP_003120500 
Protein GI256419847 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.927116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.500188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAG TGCTGTTCCT TATTCTGTTG ACGGCTCCGT TTGCCGGCCT CCATGCCCAG 
CAGCCGCAGT CTGCGATCAA GGCCTTATTA CAGAAACAAA CAGATTCCTG GAACCAGGGC
GACCTGGACG CCTTTATGAG TACCTACTGG AAATCAGACT CCCTGATATT TATCGGTAAA
CGAGGCCCGA CCTATGGCTG GCAGGCCACA CTGGATAATT ATAAACGCTC TTATCCGGAC
ACAGCTGCCA TGGGCAAGCT GAATTTCAAT TTACTGGAAA TGAAAGCATT AGCCGCTGAT
ACCTGGTTTG TGGTGGGTAA ATGGCACCTC ACAAGGACAA TTGGGGATCT GGAGGGACAC
TTTTCCCTGC TGATAAAGAA AATCAAGGGT AACTGGAAGA TCATTGCCGA CCATAGTAGC
TAA
 
Protein sequence
MRLVLFLILL TAPFAGLHAQ QPQSAIKALL QKQTDSWNQG DLDAFMSTYW KSDSLIFIGK 
RGPTYGWQAT LDNYKRSYPD TAAMGKLNFN LLEMKALAAD TWFVVGKWHL TRTIGDLEGH
FSLLIKKIKG NWKIIADHSS