Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0754 |
Symbol | |
ID | 8356866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 917362 |
End bp | 918492 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644962906 |
Product | VWA containing CoxE family protein |
Protein accession | YP_003120453 |
Protein GI | 256419800 |
COG category | [R] General function prediction only |
COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGATT TAAATAAATG GCGGCTGGTA CTCGGTGGTA ATGAATCGGA CGGTACCGGC TATTCACTCA GCGGCACAGA GCTACAGATG GATAAAACAC TGGAAGCACT GTATGACAGC GAAAAGAAAG GAGGCCTTGG TGCATCTTCT CCTAATGTCA GCCGCTGGCT GGGCGATATC CGTACCTTCT TTCCGGCATC TGTTGTACAG ATTATGCAAC GTGATGCCTT ACAACGTCTG AACATTACAC AGATGTTGTT TGAAAAGGAA ATGCTGGAAA ATGTAGAACC GGATGTACAT CTGGTGGCTA CATTATTGAC ACTGAAACAT GCCATTCCTG ATAAGACGCG TGATACGGCA AGACAGGTTG TAAAACGGGT AGTGGATGAA CTGCTGAAAA AGCTGACACA ACCTACATTA CAAGCGATTA CGGGTAGTTT GCACAGAAGT ATCCGTAACA GAAGGCCCCG TCATAATGAG ATCAACTGGC ACGCGACGAT CCTTAAAAAT CTACAGCACT ATCAACCGGA GTATAAAACG ATTATTCCTG AAACGCGTAT CGGTTATGGT CGTAGGACTA CTTCACTGAA AGATGTAGTA CTTTGTCTTG ATCAGAGTGG ATCGATGGGT TCTTCTGTCG TCTATTCCGG TATCTTCGGT TCTGTGATGG CTTCCATACC TGCGATAAAA ACACGTATGG TGGTATTTGA TACTGCTGTT GCTGATCTAA CAGAAGAACT GAAAGATCCT GTTGATCTTT TATTTGGTGT ACAACTAGGT GGCGGTACAG ATATACAGGC GGCACTCTCC TATTGTCAGC AGATCATTAC CCGTCCGGCA GATACTGTAT TGGTACTGAT CACTGATCTG TTTGAGGGAG GTAGTGACGA CAAGATGCGT AAACGTGCAA CTGAATTAAC AGCAGCGGGC GTACAGGTCA TCGTATTACT TGCTTTGAAC GATGATGGTG CTCCGGCTTA TGATCACGGT AATGCACAAT TTCTGTCCAA TCTGGGTATT CCGGTGTTTG CCTGTACGCC CGATAAATTT CCTGATCTGA TGGCTGCTGC GTTGAGTAAA CAGGATATCA ACAACTGGGC AGCCAGAGAA GATTTTATAC TAAAGAAATA A
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Protein sequence | MDDLNKWRLV LGGNESDGTG YSLSGTELQM DKTLEALYDS EKKGGLGASS PNVSRWLGDI RTFFPASVVQ IMQRDALQRL NITQMLFEKE MLENVEPDVH LVATLLTLKH AIPDKTRDTA RQVVKRVVDE LLKKLTQPTL QAITGSLHRS IRNRRPRHNE INWHATILKN LQHYQPEYKT IIPETRIGYG RRTTSLKDVV LCLDQSGSMG SSVVYSGIFG SVMASIPAIK TRMVVFDTAV ADLTEELKDP VDLLFGVQLG GGTDIQAALS YCQQIITRPA DTVLVLITDL FEGGSDDKMR KRATELTAAG VQVIVLLALN DDGAPAYDHG NAQFLSNLGI PVFACTPDKF PDLMAAALSK QDINNWAARE DFILKK
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