Gene Cpin_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0754 
Symbol 
ID8356866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp917362 
End bp918492 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content45% 
IMG OID644962906 
ProductVWA containing CoxE family protein 
Protein accessionYP_003120453 
Protein GI256419800 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATT TAAATAAATG GCGGCTGGTA CTCGGTGGTA ATGAATCGGA CGGTACCGGC 
TATTCACTCA GCGGCACAGA GCTACAGATG GATAAAACAC TGGAAGCACT GTATGACAGC
GAAAAGAAAG GAGGCCTTGG TGCATCTTCT CCTAATGTCA GCCGCTGGCT GGGCGATATC
CGTACCTTCT TTCCGGCATC TGTTGTACAG ATTATGCAAC GTGATGCCTT ACAACGTCTG
AACATTACAC AGATGTTGTT TGAAAAGGAA ATGCTGGAAA ATGTAGAACC GGATGTACAT
CTGGTGGCTA CATTATTGAC ACTGAAACAT GCCATTCCTG ATAAGACGCG TGATACGGCA
AGACAGGTTG TAAAACGGGT AGTGGATGAA CTGCTGAAAA AGCTGACACA ACCTACATTA
CAAGCGATTA CGGGTAGTTT GCACAGAAGT ATCCGTAACA GAAGGCCCCG TCATAATGAG
ATCAACTGGC ACGCGACGAT CCTTAAAAAT CTACAGCACT ATCAACCGGA GTATAAAACG
ATTATTCCTG AAACGCGTAT CGGTTATGGT CGTAGGACTA CTTCACTGAA AGATGTAGTA
CTTTGTCTTG ATCAGAGTGG ATCGATGGGT TCTTCTGTCG TCTATTCCGG TATCTTCGGT
TCTGTGATGG CTTCCATACC TGCGATAAAA ACACGTATGG TGGTATTTGA TACTGCTGTT
GCTGATCTAA CAGAAGAACT GAAAGATCCT GTTGATCTTT TATTTGGTGT ACAACTAGGT
GGCGGTACAG ATATACAGGC GGCACTCTCC TATTGTCAGC AGATCATTAC CCGTCCGGCA
GATACTGTAT TGGTACTGAT CACTGATCTG TTTGAGGGAG GTAGTGACGA CAAGATGCGT
AAACGTGCAA CTGAATTAAC AGCAGCGGGC GTACAGGTCA TCGTATTACT TGCTTTGAAC
GATGATGGTG CTCCGGCTTA TGATCACGGT AATGCACAAT TTCTGTCCAA TCTGGGTATT
CCGGTGTTTG CCTGTACGCC CGATAAATTT CCTGATCTGA TGGCTGCTGC GTTGAGTAAA
CAGGATATCA ACAACTGGGC AGCCAGAGAA GATTTTATAC TAAAGAAATA A
 
Protein sequence
MDDLNKWRLV LGGNESDGTG YSLSGTELQM DKTLEALYDS EKKGGLGASS PNVSRWLGDI 
RTFFPASVVQ IMQRDALQRL NITQMLFEKE MLENVEPDVH LVATLLTLKH AIPDKTRDTA
RQVVKRVVDE LLKKLTQPTL QAITGSLHRS IRNRRPRHNE INWHATILKN LQHYQPEYKT
IIPETRIGYG RRTTSLKDVV LCLDQSGSMG SSVVYSGIFG SVMASIPAIK TRMVVFDTAV
ADLTEELKDP VDLLFGVQLG GGTDIQAALS YCQQIITRPA DTVLVLITDL FEGGSDDKMR
KRATELTAAG VQVIVLLALN DDGAPAYDHG NAQFLSNLGI PVFACTPDKF PDLMAAALSK
QDINNWAARE DFILKK