Gene Cpin_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0738 
Symbol 
ID8356850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp893849 
End bp894853 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content42% 
IMG OID644962890 
Producthypothetical protein 
Protein accessionYP_003120437 
Protein GI256419784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.769351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000498212 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGTAT TAATTTTTGT GATTGCCACT TTATTGATTG CCATCTGCGC ATTTAGTATT 
TACGAATGCA GGCAGAAACC TGGCGCTCCC TCTCAGCATG TGCTATCCTG GTATGTACCT
GGTGTAAACA AACTGAAAAC GAAAGTGGAT AACTTATGTC ATTCGCTTGC TACACATCAG
TCTTCAGCAG CAGTACAACA GGCTTTTTGT GAATCCAGAC TGGCTTATAA GGAGATAGAA
GTGCTTGCAG AATATTTTAA TCCGTTTACA GTACAGCTGA TTAATGGTAA AGGTGATGAT
ACCACCGGTA ATAAAGAGGG TAAAGCTTTT CAGCAGATAG AACGTCTTTT ATATCCTTCG
CTACAGGCAG CAGATACGCA GATGGCTTAT GTGGAAGCAC GTAAACTGGC TGCTGCTGTG
AATATACTTG CACAGGAAAA TGAACGCCCC GCTCCTACGG ATGCGCAATT ATTTGACGCT
ATGCGCCTGG AACTGGTGAG GATCATTTCA TTGGGTATCA GTGGTTTTGA TTCTCCGGAA
GCGTGTGAGA GCATGAAAGA AGCAGCTGCT TCGTTAGAAG GTGTCAGACA GCTGTGGAAC
CTGTATGCAG ATCGTGTGAA TATCTATAAT CCCACACTCG TAAAATATAC TGAAGAATTG
ATGACGGTTG CCTCACAGCA ATTGTCTCGG GGAAATCATA ATCATTTCAA CAGACAGTTG
TTTATCAGCG ATTACATGAA TCATCTTTCT ATCAATCTCA AACTGTCAAG AGAAGCCCTG
TCTATCCCTT ATGATGATGA TACCTATGTA TTGGATCCTG CGGCATCTAA TATTTTCGCA
AGAGATGCGG TACATCCATT GTATGTGACT GTGGATGCTA TACAGGATTC TACCGGCAGT
AATGATCCTT TGTATGAAAT AAACGGACAG CAATTCAGGG CGAGTTACAT GTACAACTTA
TTACAACAGA ATGGTGCACT GAATACAGTA GCCGCCGGGA ATTGA
 
Protein sequence
MRVLIFVIAT LLIAICAFSI YECRQKPGAP SQHVLSWYVP GVNKLKTKVD NLCHSLATHQ 
SSAAVQQAFC ESRLAYKEIE VLAEYFNPFT VQLINGKGDD TTGNKEGKAF QQIERLLYPS
LQAADTQMAY VEARKLAAAV NILAQENERP APTDAQLFDA MRLELVRIIS LGISGFDSPE
ACESMKEAAA SLEGVRQLWN LYADRVNIYN PTLVKYTEEL MTVASQQLSR GNHNHFNRQL
FISDYMNHLS INLKLSREAL SIPYDDDTYV LDPAASNIFA RDAVHPLYVT VDAIQDSTGS
NDPLYEINGQ QFRASYMYNL LQQNGALNTV AAGN