Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0738 |
Symbol | |
ID | 8356850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 893849 |
End bp | 894853 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644962890 |
Product | hypothetical protein |
Protein accession | YP_003120437 |
Protein GI | 256419784 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.769351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000000498212 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGTAT TAATTTTTGT GATTGCCACT TTATTGATTG CCATCTGCGC ATTTAGTATT TACGAATGCA GGCAGAAACC TGGCGCTCCC TCTCAGCATG TGCTATCCTG GTATGTACCT GGTGTAAACA AACTGAAAAC GAAAGTGGAT AACTTATGTC ATTCGCTTGC TACACATCAG TCTTCAGCAG CAGTACAACA GGCTTTTTGT GAATCCAGAC TGGCTTATAA GGAGATAGAA GTGCTTGCAG AATATTTTAA TCCGTTTACA GTACAGCTGA TTAATGGTAA AGGTGATGAT ACCACCGGTA ATAAAGAGGG TAAAGCTTTT CAGCAGATAG AACGTCTTTT ATATCCTTCG CTACAGGCAG CAGATACGCA GATGGCTTAT GTGGAAGCAC GTAAACTGGC TGCTGCTGTG AATATACTTG CACAGGAAAA TGAACGCCCC GCTCCTACGG ATGCGCAATT ATTTGACGCT ATGCGCCTGG AACTGGTGAG GATCATTTCA TTGGGTATCA GTGGTTTTGA TTCTCCGGAA GCGTGTGAGA GCATGAAAGA AGCAGCTGCT TCGTTAGAAG GTGTCAGACA GCTGTGGAAC CTGTATGCAG ATCGTGTGAA TATCTATAAT CCCACACTCG TAAAATATAC TGAAGAATTG ATGACGGTTG CCTCACAGCA ATTGTCTCGG GGAAATCATA ATCATTTCAA CAGACAGTTG TTTATCAGCG ATTACATGAA TCATCTTTCT ATCAATCTCA AACTGTCAAG AGAAGCCCTG TCTATCCCTT ATGATGATGA TACCTATGTA TTGGATCCTG CGGCATCTAA TATTTTCGCA AGAGATGCGG TACATCCATT GTATGTGACT GTGGATGCTA TACAGGATTC TACCGGCAGT AATGATCCTT TGTATGAAAT AAACGGACAG CAATTCAGGG CGAGTTACAT GTACAACTTA TTACAACAGA ATGGTGCACT GAATACAGTA GCCGCCGGGA ATTGA
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Protein sequence | MRVLIFVIAT LLIAICAFSI YECRQKPGAP SQHVLSWYVP GVNKLKTKVD NLCHSLATHQ SSAAVQQAFC ESRLAYKEIE VLAEYFNPFT VQLINGKGDD TTGNKEGKAF QQIERLLYPS LQAADTQMAY VEARKLAAAV NILAQENERP APTDAQLFDA MRLELVRIIS LGISGFDSPE ACESMKEAAA SLEGVRQLWN LYADRVNIYN PTLVKYTEEL MTVASQQLSR GNHNHFNRQL FISDYMNHLS INLKLSREAL SIPYDDDTYV LDPAASNIFA RDAVHPLYVT VDAIQDSTGS NDPLYEINGQ QFRASYMYNL LQQNGALNTV AAGN
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