Gene Cpin_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0720 
Symbol 
ID8356832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp863493 
End bp864128 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content49% 
IMG OID644962872 
Productnicotinamide mononucleotide transporter PnuC 
Protein accessionYP_003120419 
Protein GI256419766 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.258508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTG ACGCACTATA TCAGGGATTG CTGGCAGGCG TACACCAAAT GAGCTGGCTG 
GAAATCATAG CGGCTTTGTT TGGCGCGATC AGTGTGATAT GCAGTAAGCA GAACAGCATC
TGGCTGTATC CTACAGGACT GGTGAGCACG GGAATCTATG CTTACCTGTT GTCAAGGGAG
CAGTTTAAGC TGTATGCCGA GGCAACGCTG AACGTCTACT ATTTTATCAT GAGTGTATAC
GGGTGGTACC ATTGGGCCAG GAAGAGTGCA AGCGAACCGG AAACACCTGT CGGCTGGGCT
ACCCGGAGTG AATGGATGGT AACAGGCGGT ATTACCTTAA TTGGCTGGGC CTTATTCGGG
TATCTGCTCA GGAACTATTC CAATTCAGAT GTTCCGGTAA TAGACGCATT TGTATCTGCA
ACAGCTTGTG CCGGTATGTG GTTACTGGCG AAAAGGAAGA TCGAGAACTG GGTGGTATTG
AATGTGTCCA ACCTGGTAGC GGTACCGCTG TTATTTCATA AGCACCTGCT ACCGACGGCG
GTGCTGACCA TATTCCTGTT CATTGTGGCG GTAATGGGAT ATTTCAGCTG GAGAAAGATA
TGGCGTGAAC AAAATGCACC CGGACTGGCC AAGTAA
 
Protein sequence
MNFDALYQGL LAGVHQMSWL EIIAALFGAI SVICSKQNSI WLYPTGLVST GIYAYLLSRE 
QFKLYAEATL NVYYFIMSVY GWYHWARKSA SEPETPVGWA TRSEWMVTGG ITLIGWALFG
YLLRNYSNSD VPVIDAFVSA TACAGMWLLA KRKIENWVVL NVSNLVAVPL LFHKHLLPTA
VLTIFLFIVA VMGYFSWRKI WREQNAPGLA K