Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0659 |
Symbol | |
ID | 8356771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 799535 |
End bp | 802870 |
Gene Length | 3336 bp |
Protein Length | 1111 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644962811 |
Product | superfamily I DNA and RNA helicase |
Protein accession | YP_003120358 |
Protein GI | 256419705 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0681058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATG CCCAGCCCAT TAATATGTCA GTGAATAAGA CTAATGCATC CCCGCATCAC CTTACCGGTC ATGCCTGTTA TATGCGTCTG CTGGAAATTT CCGACAGACC ATCTCCCGTA GAGATCATAC GGCACCTGAG ACAACTGCTC GATCAGTTGT TCCGGCACCT TACCCGGGAA GAACCCCGTA GCTTCGGCAA TCTCTTTGCC CGGATGCAGT TCTACTTCGA TAAATACACC GTTCCCCCAC ACCTGGAGGA ACAATTAACC ATACTTCGCA TACTTACTTA TAAAGCCATT AACCATCATC TGCGAACAGA CGATGAACTG GCCCTGATCT GCATCCGCAC AATGGCAGAC ACCATCTGTC ATTTTTTTGA GGAACCCATT CCTGAAATAC TGGAGGGCTT GTGCTGTAAC GTGAAAGAAA AAACATTATC CTATGCGCCA CAGCTTTCGG AAGAACTGGT ACCGCAATTG AAATGTCTGG TCACACAGGT GGGTAATCTC CAGAAAAAAC CAGGACATGC CCCTTATTTT ATGCTGGGCT GTCATAACGA CGAACTGGGA CCATTTCAGC TGATGATCTC AGAAAGCGTG TATACACATG CCACTTCGCT GCATACGCAG TTAAGAGCCT ACGATACCAT ACACGTACTC TATTGCAGCA AAAGCGAGGC GCCACAGGTA TATGAAGCAG TAAGTGTTAC CCGCATCATC CTGGAGCCAG ATCTGCTGAT CGACATCAGC GACCTGGCGG AATGTTTCGG AAGACACGGC TCGCATAAAC TGCTTTACCT GGTGAGAAAA CTGGTGCCGC AGACGCCAGG CATTGCCGCT TTTAAGGGGA ACGTAGTCAA CTCCCTGCTG GACAATGTAT TGCGCGATCC GAAAATGGAG CTGCGACAGT CCTTTGTAGA AGCAGTAACC GATCACGTAT TACAGGCGGC CGCTTACGGC AGAGAAGCGC TCAACAGCAT GTTTGCCGAC ATACGCAGTC TGCACTGGCC CAACCTGCTG CAATCAGCCG CAGAAATGCA TAACCGACCC GTCAGAATAG AGCCGACCTT CTTCTCCGCC AACTACGGAC TACAAGGACG ACTGGATATC CTGGCAGAAG ACGAAAGTGA TCCCCTGCGC AAAGAAATCT TCGAATTAAA AAGCGGACGC AGTCCGGAAT ATGGCGCCTG GAAGAATCAC GAAATGCAGG TAGTCGGCTA TAATCTCCTC CTGCAATCCG CTTTTGGCGA TGAAAGACGC GGCAGTTCTG CGATCCTTTA CTCCGCAGCA GCAGATACGC CACTCCGGAA TGTCAGCAGC AGCCGGCAGG CAGAAAACGA ACTGCTGGCA CTCAGAAATG AAATAGTATC CCAGTTGCTG AGACTAGCAG CCGGTGAATA CGATATACTG GATAAAATCA CAGAGGAAGC AGCTGAAGGA TTACCGGCTT TTAACGTGGT GCACTTCACC GCCTTCCACG AGGTATACCA TAATGCCAGC CCTTTACTAC GGACTTACTA TCAACAGTTT CTGTCCTTTT TGTTAAGAGA ATACCTCTTG GCGAAATGCG GCATGTACTC CGCCGCCGAA AGGGAAGAAG ACGCCGAAGG TTTTGCCGCC TTATGGCTGC TGCACGAGCA GGAAAAACTG GAGCGTTTTA ATATCATGCC CGGTCTGCAA TTCCGGCATT TCGATACCGA CAGCAGTACG GTGGTCTTTA ATGTCCAGAT TCCGGTCAAC CATAACTTCC GTCCGGGAGA TACTGCTATT ATCTATCCCC GTTCAGCTGA CGGACTCTTT CCCCTCCGTC ACCAGGTACT TAAAGGCAGG ATCGATGACC TTGCAAAAGA TACACTTACA TTCTCGCTCA ATAACCGGCA GATTGGTCAT GACTTCTTTG CACAGCAACA GTTATGGGCG ATCGAACACG ATATCTATGA ATCGAATTAC TGGATAGCGG CAACCGCTTT GTTTCATGTA CTGGAGCCCC GGTTACAGGA GAAAATGGAG CTACTGCTGG GACGCAGAGC GCCGCAGACG GCTCCTATAA GTATTCCCGT ACCAAAGATG TTCAATAACA ACCAGCAGGA CATTCTCCAG GCTGCGCTGG ACGCCGAGGA CTATTACCTG ATACAGGGAC CACCCGGCAC CGGTAAGACC TCTGCCTTGC TGACCGCATT GGTGGGCGTA TTGGCAGAGA CAGAAACACA GACGATCGTG GTTGCTTTTA CCAACAGGGC TGTGGAAGAG ATCTGCCGGA AACTGGATAC CAAAGGCATT GCTCACCTGC GTATGGGTAG CCGCCGTTCT GCTACCGAAA ATCGCCTGCG GCAGTATTGT CTGGAAGGAG ACATCGCGGG CGCTGCGCAG TTCATTCTTC AGCAACGCGT ATTCGTAGGT ACTGTAGCCA CCATGGCGAC CCGCCTGCAC CTGTTACAGA TGCTGGGGGT AAAAACAGAC GTCCTGATTG CAGACGAAGC CTCTCAGCTT ACAGAGCCAC AATTACTGGG TTTACTGATG CCGTTCAGGA AATTTATCCT GATAGGTGAT CAGAACCAGC TGCCTCCGGT AGTAGCCCAG GACGATTTTT TCTGCCATAC CACACAGGCT TTACTAAATG CAGAAGGGAT CTCCGATCTG CGTTGTACCT TGTTTGAACG GCTGATCAGG CGTTGTAAGG ACAACCACTG GCACTATGCC TGGGGTATGC TGAATACACA CTTCCGTATG CATACGGATA TCGCCTCACT GATCAATCAC TATTATGCCG GTCAGCTCTC TGCAGGTAGC GTGCAACAGT CAGTCCCTTA CAATATGACA GAACATCCGG GTAGTGAAAA TTGGGCACAG ATACTGTCGA AAGGGCGTAC GCTGTTCATC CCCAGTCCGC TGGAACCTAC TTCTAAAATG AACAGGACAG AGGCCAACAG GGTCGTATCG CTGCTACACT ATCTGCGTAA CCGGTACGGG CATCGTTTCA GCAAGGAAAC CGTTGGTGTG GTAACGCCCT GGCGTACACA GATCAGTCTT ATCCGGGAAA TGATCGGTAA TGACGAGCAG TTACAGGCCA TCAATATTGA CACGGCAGAA AGATTTCAGG GAGCGGAAAA CGATATCATT ATTATCTCAC TGGCGGTATA CCATCCGGTA CAACTGGGTT TGTTGCAAAA CCTGGGTGTA TTTCACTGGG AGCAGGACAG GGTAGAGGTA GACAGGAAAC TGCTGGTCAC CTTGTCACGT GCAAGGCACC AGGTGATCAT TATGGGATAT GAACCGGTAC TGAGAGCCAG CAGTCATTAT AAAGAACTGC TGAATAGCGT CACTAGTTGC GTATAA
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Protein sequence | MIDAQPINMS VNKTNASPHH LTGHACYMRL LEISDRPSPV EIIRHLRQLL DQLFRHLTRE EPRSFGNLFA RMQFYFDKYT VPPHLEEQLT ILRILTYKAI NHHLRTDDEL ALICIRTMAD TICHFFEEPI PEILEGLCCN VKEKTLSYAP QLSEELVPQL KCLVTQVGNL QKKPGHAPYF MLGCHNDELG PFQLMISESV YTHATSLHTQ LRAYDTIHVL YCSKSEAPQV YEAVSVTRII LEPDLLIDIS DLAECFGRHG SHKLLYLVRK LVPQTPGIAA FKGNVVNSLL DNVLRDPKME LRQSFVEAVT DHVLQAAAYG REALNSMFAD IRSLHWPNLL QSAAEMHNRP VRIEPTFFSA NYGLQGRLDI LAEDESDPLR KEIFELKSGR SPEYGAWKNH EMQVVGYNLL LQSAFGDERR GSSAILYSAA ADTPLRNVSS SRQAENELLA LRNEIVSQLL RLAAGEYDIL DKITEEAAEG LPAFNVVHFT AFHEVYHNAS PLLRTYYQQF LSFLLREYLL AKCGMYSAAE REEDAEGFAA LWLLHEQEKL ERFNIMPGLQ FRHFDTDSST VVFNVQIPVN HNFRPGDTAI IYPRSADGLF PLRHQVLKGR IDDLAKDTLT FSLNNRQIGH DFFAQQQLWA IEHDIYESNY WIAATALFHV LEPRLQEKME LLLGRRAPQT APISIPVPKM FNNNQQDILQ AALDAEDYYL IQGPPGTGKT SALLTALVGV LAETETQTIV VAFTNRAVEE ICRKLDTKGI AHLRMGSRRS ATENRLRQYC LEGDIAGAAQ FILQQRVFVG TVATMATRLH LLQMLGVKTD VLIADEASQL TEPQLLGLLM PFRKFILIGD QNQLPPVVAQ DDFFCHTTQA LLNAEGISDL RCTLFERLIR RCKDNHWHYA WGMLNTHFRM HTDIASLINH YYAGQLSAGS VQQSVPYNMT EHPGSENWAQ ILSKGRTLFI PSPLEPTSKM NRTEANRVVS LLHYLRNRYG HRFSKETVGV VTPWRTQISL IREMIGNDEQ LQAINIDTAE RFQGAENDII IISLAVYHPV QLGLLQNLGV FHWEQDRVEV DRKLLVTLSR ARHQVIIMGY EPVLRASSHY KELLNSVTSC V
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