| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0647 |
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| Symbol | |
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| ID | 8356759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 786635 |
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| End bp | 787249 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962799 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003120346 |
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| Protein GI | 256419693 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000028477 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.274345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGGCA TTAAACATAT CATTTTCGAT CTGGGCGGAG TCATTATCAA CCTGGATTAC
CAGCTGACCT ACAAGGCATT TGAAGCACTG GGTGTAAAGG AATTCACCAG TTTGTACAAT
CAGTTCTCAC TGAACGCACT CTTTGACGAT CTGGAAACGG GTAAGATAGC CCCGGATGTA
TTCCTGGATG AGATGCAGAA GCATACCGCG CCAGGTACTA CGCATCAGCA GATTATTGAT
GCCTGGAATG CGATGTTGCT GGATTTCCCT TTACGCAGGT TACAGATCCT GCAGCAGTTA
AGGCAGCATT ACGGATTGTA TTTGCTGAGC AATACCAACG AGATTCATAT GCAGGCTTTT
AATAAAATAT TGGAGGAGAG CAGGGGGATA CCTTCACTGG CTGCGTTTTT TGATAAGGCG
TATTATTCGC ACCAGATTGG GTTACGTAAA CCTTTTAAGG AATCGTTTCA GTTTGTGCTG
GATGAGAATG GCCTGGATCC GGCCGAGACC TTATTTATAG ATGACACCCT GCCGAACATT
GAAGGCGCGA AGGTGGTTGG CCTGCAAACA ATTCATTTAC TGCCACCGAA GACGATGGCA
GATATTTTCA AATAA
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| Protein sequence | MKGIKHIIFD LGGVIINLDY QLTYKAFEAL GVKEFTSLYN QFSLNALFDD LETGKIAPDV
FLDEMQKHTA PGTTHQQIID AWNAMLLDFP LRRLQILQQL RQHYGLYLLS NTNEIHMQAF
NKILEESRGI PSLAAFFDKA YYSHQIGLRK PFKESFQFVL DENGLDPAET LFIDDTLPNI
EGAKVVGLQT IHLLPPKTMA DIFK
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