| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0603 |
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| Symbol | |
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| ID | 8356714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 736617 |
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| End bp | 739046 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962754 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003120302 |
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| Protein GI | 256419649 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.237353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA GCAACTTCAA ACTCTCCTTC CGCGCCATTT GGAAGAATAA GTCATTCTCC
CTCATTAATA TACTGGGATT GGCTGTTGGT ATTGCAGCCA GCTTACTCAT ATTCCTGGTT
ATTCACTATG AAAAGAGCTA TGATACTTAT CAGAGCCGGT ACGATCGTAT TGCCAGAATG
GTGACGATAG ACCATAACCC TACTACCGGA GAGGTGACGG GCTCGCATAG TATGGCTCCT
CGTCCGCTGG CGGATGCTCT ACGCCGGGAC TTTCCGGGAT TGGAGAAGGT TGCTGCGATG
CAGGGTGTTG GTTCCGCACA GTTTTATATA CCCGTGCAGG GACAGGAAGA AAAGAAATAC
AAGGTAGACA GAGGCGTCTT TTTCGCTGAA CAATCCCTGT ATGACATTTT TGATTTCAGC
TGGATAGTTG GTAATACAAA AGGGCTGGAA GAACCGAATA CCGCTGTGAT CAATGAGTCT
ATCGCCCGGA GGTTTTTTGG TACGCCCGAA AGTGCCATAG GTAAAACCGT TCAGATGTGG
TCGTACCGGG TGCCTTTGCG TGTTACCGGC GTCTTTAAAG ACCTGCCGGA AAACACGGAC
GTGCCGGTAT GTATTGGCGC TTCTTACCCG ACATTCAAAA ACTTGATAGG AAAAGATTGG
GACAGCTGGC GGAGCCTGGG AGGTGGTACA CAGCTGTTTG TATTACTATC CCCCAGCCAG
GAGCTTGCTA AGCTACAGGC ACAGAGTCCG GCTTTTGTGA AAAGGAATTA CCGTGAAGAA
CAGGAACATG CGCTGACACG TATAGACCTG CGTTTTCAAC CGATGCGTGA GGTACACGTG
GACAAGCGTT TTGATACACT GAAGAAAGAT AATCTGAGTC CGCAGGAATT GTGGGGTATG
ATGCTGATCG GCGCCTTTCT GCTAATGGTC GCTTGTGTGA ATTTTATCAA TCTGGCGACT
GCGCAATCCA TTAATCGTGC AAAAGAGATT GGTGTAAGAA AGGTGCTGGG TAGCGATCGC
CCACAGCTGA TCAGGCAATT CCTGCAAGAG ACAGCACTGA TCACAGCATT GGCAGTTGTA
TTAGGTAGTC TGATCGCCTT GATAGCGACG CCGTATCTGA GTGATCTTAT GGGCAAGCAG
TTGTCTATGA ACGTATTGCA TTCCCCGGTT ATACTCCTGT TCCTGTTGAT CATTGGTCTG
GTGGTGACTT TACTGGCAGG CTTCTACCCT GCCCTGGTAT TGTCTGGGTT TAATCCGCTG
TTAGCGATTA AGAGCAGGAT CAGTAACCGG ACAGTAGGCG GTATATCCCT GCGTCGCGGA
CTGGTCGTGT TCCAGTTCGT CATTGCGCAG TTGCTGGTGA TCGGTACGCT GGTCGTTATT
AAACAGATGT CTTTCTTCCG GAATAAATCC TTGGGATTTG AGAAGGAGGC GGTGGTAATG
GTGGATCTCC CCAGTGATAG CTCATTGAAA GTGAGATATC CTTACCTGGT AGCAGAGATG
AATAAGCTGA AAGGTGTAGA AGCAACCAGT TTGTGCTGGA CGGCGCCTGC CTCCAATGCA
ATACAGTTAA GTGACTTCTA TTTTAACAAT GACACCGAGA AACAGCCTTA TTCTGCCAAG
CGGCTGTATG GCGACTCTGC TTATTATAAC CTGTTCAGAA TGAGTCTGGC TGTGGGCCGG
CTACCGTTCC CGAGTGATAC GATCAGGGAG TTGTTGATCA ATGAAACACT GGTTAAAAAA
CTGGGTCTGG GATCATCTGA AGATGCATTG GGTAAAACGA TCAGGTTTAC CGGAGGGCAA
GCCTATCCTA TCGTGGGTGT CGTGAAAGAT TTTAATGACA ATTCCCTACG GGATGGTATT
TCGCCTGTGG TGATTGCGCC GGATTTTAAC GGTTATGGTA CCCTGGCATT GCGTCTTCGT
AAGGATGATG TGAATACAAC TCTGAAGGCG GTAGAAAAAC GATTCAAGGA GATCTACCCG
ACCTATATGT ATGATCTGAC ATTCGTCGAT GATAGTATCA GGAGCTTTTA TAGCAATGAA
GCGCTGATAG CCAAGCTGTT CCAGATATTC GCGATACTGG CTATTTTCAT ATCTAGTCTG
GGGCTTTATG GGCTGGTATC GTTCATGGCG GTGCAGAAAA CGAAGGAGGT GGGTATCCGG
AAAGTACTGG GAGCTTCTAT TCAAAGTATT CTATACCTGT TTTCCCGGGA GTTTACCATC
CTGATAGGAG TTGCATTTCT GATTGCTACA CCGGCGGCAT ACTATTTTAT GCATCGCTGG
CTGTCAGGAT TCCATTATCA CACAGATATG GGCTGGGAAA TCTTCCTGTT GGCGATTGTA
ATGTCGCTGG TGATTGCTTG GCTGACAGTA GGATACAAAG CGGTAAGGGC CGCTACGGCC
AATCCGGTAA AGAGTCTGAG GGCGGAATAG
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| Protein sequence | MMNSNFKLSF RAIWKNKSFS LINILGLAVG IAASLLIFLV IHYEKSYDTY QSRYDRIARM
VTIDHNPTTG EVTGSHSMAP RPLADALRRD FPGLEKVAAM QGVGSAQFYI PVQGQEEKKY
KVDRGVFFAE QSLYDIFDFS WIVGNTKGLE EPNTAVINES IARRFFGTPE SAIGKTVQMW
SYRVPLRVTG VFKDLPENTD VPVCIGASYP TFKNLIGKDW DSWRSLGGGT QLFVLLSPSQ
ELAKLQAQSP AFVKRNYREE QEHALTRIDL RFQPMREVHV DKRFDTLKKD NLSPQELWGM
MLIGAFLLMV ACVNFINLAT AQSINRAKEI GVRKVLGSDR PQLIRQFLQE TALITALAVV
LGSLIALIAT PYLSDLMGKQ LSMNVLHSPV ILLFLLIIGL VVTLLAGFYP ALVLSGFNPL
LAIKSRISNR TVGGISLRRG LVVFQFVIAQ LLVIGTLVVI KQMSFFRNKS LGFEKEAVVM
VDLPSDSSLK VRYPYLVAEM NKLKGVEATS LCWTAPASNA IQLSDFYFNN DTEKQPYSAK
RLYGDSAYYN LFRMSLAVGR LPFPSDTIRE LLINETLVKK LGLGSSEDAL GKTIRFTGGQ
AYPIVGVVKD FNDNSLRDGI SPVVIAPDFN GYGTLALRLR KDDVNTTLKA VEKRFKEIYP
TYMYDLTFVD DSIRSFYSNE ALIAKLFQIF AILAIFISSL GLYGLVSFMA VQKTKEVGIR
KVLGASIQSI LYLFSREFTI LIGVAFLIAT PAAYYFMHRW LSGFHYHTDM GWEIFLLAIV
MSLVIAWLTV GYKAVRAATA NPVKSLRAE
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