| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0552 |
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| Symbol | |
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| ID | 8356658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 671996 |
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| End bp | 673840 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644962698 |
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| Product | Chloride channel core |
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| Protein accession | YP_003120251 |
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| Protein GI | 256419598 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.18832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAA TCAAAACAAT CAGACGTTAT CACTCATTTT TCAGGTTTAA ACGGGATTTT
GAACGTTATA GCTTAAGGAA AGTAAGGAGT TACGAAATTA TTATTCACTG GCTGCACAAA
GTTTTAAGCA GAAGCCAGTT CCTGATTCTC TCAGGTATTC TTGTAGGGCT GGTTGCCGGT
ATGGCCGGTG TCATCCTTAA AGTATTGGTG CACTATATCC ACTACTTTAT TACGTACAGG
GTGCATTTCA GCACACAGGT CATCTTTTAT GCATTATTCC CGTTTCTGGG AATTCTGCTG
ACAACCATAT TGGTAGTCTG GGTCTTTAAA GGGCAATCCA GAAAAGGAAT TGGTCTGATT
CTTTATGAGA TCGCGCAGAA CTCCAGTAAA ATTCCATCCG TAAAAATGTA TTCCCAGATC
CTGCAAAGCG CCATTACCGT CGGATTAGGC GGTTCTGCCG GATTGGAAAG CCCGATTGCA
GTAACTGGTG CAGCAATCGG TAGTAACTAT GCTACAAATT ATAATCTTGG ATACAAGGAA
AGAACGCTGT TATTAGCTGC CGGCGCCACA GCCGGTATAG CCGCCTCTTT CAATGCCCCG
ATAGCAGGGG TGATGTTTGC ATTTGAAATA TTGCTCACCG GTGTTGTGTT TTCAGATTTC
ATTCCGTTGA TACTGGCAGC AATATGTGGT AGTTTATTGT CTAAAATCAT TCTTCAGGAA
GAGGTACTTT TTCACTTTGA AACAAGACAG CCCTTTAACT ATCATAATGT CCCCTTCTAC
ATTGCGCTGG GTTTATTATC AGCACTATAT GCCCGCTACT ACATCGTCAT ATCGCAGCAT
GTCGAGCATT TCATGGTAAA ATTAAAATGG CCTGCGCTTC GTAAGGCGAT ACTTGGAGGT
GTGATTGTAT CCATCCTTTG TGTGCTGATG CCACCGTTGT TCGGGGAAGG TTATTCCAGC
CTCAAACTCC TGACGGGTGG CTTCTCAGAC CAAATTATTC AAAATAGTTT CTTCCGGTAT
CTCCCTGAAA AAAGCTGGAT ATTACTGGCT TTCACAGGTT TCACCTGTTT GCTGAAAGTA
TTTGCCACCA GCTTTACCAT CCAGGGAGGC GGGAATGGTG GTAACTTTGC GCCGTCCCTG
TTTGCCGGAG GCTTCCTGGG TTATTTCTTC GCCCTCCTCT GTACTAATTT CGGATTTCAG
GATGTACCCT TTGCCAACCT GGTTCTTGTA GGTATGGCCG GTGTAATGAG CGGCGTGATG
TATGCACCGC TGACAGCTAT TTTCCTCATC GCAGAGTCCA GTTTTGGATA TGATCTGTTC
ATTCCACTGA TGATTGTGTC TACCATATCT TTTGTGGTGG CCAAATGGTT TTCTCCGATC
TCCCCCGAAC TGAAACATCT GGCGGAAGAA GGAAAAATAT TTACCAAAGC CCATGACAAA
AATATCCTGT CGCTCTTAAA GCTGGAGAAC CTTATAGAAA AAGACGTACA AACTATCGCG
GCCGATCAGA AACTACGGGC GCTCATTGAG CTGATCAAGG AGGGACACCG CAATATGATC
GGTGTTGTCA ACGCAGCAGG CGGACTGGAC GGCATCATCA CACTGGATGA TATCCGCCCG
ATCATGTTTA ATGCTTCCCT ATATGACATC ACGACTGTCA GTCAGTTTAT GAAGCCGTCA
CCGGTGACCG TCCAGTTGCA CGATAATGTT GCTGATGTAA TTAATAAATT TGAAGAAGTA
CATACATGGA ACCTGCCGGT ACTGGAGGAT AATAAACTGG TAGGGTTTGT TTCAAAATCA
GGGATCCTTA ATCAGTACAG ACTATTATTA CAGGAATACT CCTGA
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| Protein sequence | MSQIKTIRRY HSFFRFKRDF ERYSLRKVRS YEIIIHWLHK VLSRSQFLIL SGILVGLVAG
MAGVILKVLV HYIHYFITYR VHFSTQVIFY ALFPFLGILL TTILVVWVFK GQSRKGIGLI
LYEIAQNSSK IPSVKMYSQI LQSAITVGLG GSAGLESPIA VTGAAIGSNY ATNYNLGYKE
RTLLLAAGAT AGIAASFNAP IAGVMFAFEI LLTGVVFSDF IPLILAAICG SLLSKIILQE
EVLFHFETRQ PFNYHNVPFY IALGLLSALY ARYYIVISQH VEHFMVKLKW PALRKAILGG
VIVSILCVLM PPLFGEGYSS LKLLTGGFSD QIIQNSFFRY LPEKSWILLA FTGFTCLLKV
FATSFTIQGG GNGGNFAPSL FAGGFLGYFF ALLCTNFGFQ DVPFANLVLV GMAGVMSGVM
YAPLTAIFLI AESSFGYDLF IPLMIVSTIS FVVAKWFSPI SPELKHLAEE GKIFTKAHDK
NILSLLKLEN LIEKDVQTIA ADQKLRALIE LIKEGHRNMI GVVNAAGGLD GIITLDDIRP
IMFNASLYDI TTVSQFMKPS PVTVQLHDNV ADVINKFEEV HTWNLPVLED NKLVGFVSKS
GILNQYRLLL QEYS
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