| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0545 |
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| Symbol | |
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| ID | 8356651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 648742 |
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| End bp | 650154 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962691 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003120244 |
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| Protein GI | 256419591 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACATA CACAGGCAGG TTCCCGCCTG GGCAAGGCAT TCCGGCTGTT TATAATGGCT
GTGTCAGGTA CGGAAAAAGA ATTTACCAGT GGTAATATCA ACCGTGCTAT TTTTTTATTA
TCTGTTCCGA TGATACTGGA AATGGTGATG GAGTCACTGT TTGCAGTTGT TGATATATTT
TTTGTAAGTA AACTGGGTAA ACATGCGATT ACTACTGTTG GACTGACAGA GTCTATCATG
ACGCTGGTAT ACACTGCTGC ATTCGGTTTA AGCATGGCGG CTACGGCTGT TGTGGCACGC
CGCACAGGTG AAAAGGACAA TGATGCAGCT GCACATACTG CTGTACAGTC ATTGTACGTC
GCGCTTGTAC TGGCAGTTAT TATCGCTTTC ATCGGTATTG TATTTGCCAG TGAAATACTT
GCTTTAATGG GTGCCTCTGA TGAGGTGATC TATAACGGAT ATATTTACAC GCAGATTATG
CTAGGAGGTA ACCTGATTGT TATCCTCATA TTTCTGATCA ATGGTATATT CAGAGGTGCT
GGTGATGCAG CTGTCGCCAT GCGTTCCTTA TGGATTGCGA ATATTCTGAA TATCCTGCTG
TGTCCTTTAC TGATTAATGG ATTCGGACCT GTTCCGGCCT TAGGCCTGAA AGGCGCTGCA
CTGGCCACTA CGATTGGCAG AGGTATTGGT GTCTGTTATC AGTTATATCA CCTGTTTGGA
GGTAAAGGAC TGATAAAAAT AAACAGTCGT CACTTGCTGC CTGATATGAG CGTGATCATA
AGATTACTTA AAATAGCAGC AGGTGGTACT GCGCAGTTGC TGATCAATAC TGCCAGCTGG
ATATTCCTGG TCAGGTTAAT TGCCCGGTTT GGAGAAGATG CCGTTGCCGG TTATACGATA
GCAGTGCGTA TTATTATTTT TACCCTGTTA CCTGCTTCCG GTATGGCGAA TGCGGCCGCG
GCACTTGTGG GACAGAACCT TGGCGCCGGA CAACCAGACA GAGCGGAAAC CTCGGTGTGG
AGAGCCGCAT TTTTCAACAT GCTTTTCCTG GGATTTGTAT CGGTATTTTT CCTGCTGGCA
GCAAGACCTA TCGTTATGTT GTTTACACAG GATACGGGTA TTATCGCTTA TGCTGCCCAG
TGTTTGCAGC TGGTCAGCGT GGGTTATATA TTCTACGCCT ATGGCATGGT GCTTTCGCAG
TCCTTTAACG GCGCTGGTGA TACGCGTACG CCTACGCTGA TCAATCTTGT CGGTTTCTGG
ATGTTGCAGG TCCCGATGGC CTGGATGATG GCGGTGAATT ATAATATGGG CCCTGCAGGC
GTGTTCTGGG CGATTGCTAT CGCCGAGTCC TGTGTAGCGG TTGCAGCAAT ATTTATATTC
AGGAAAGGAT GGTGGAAGCG GGTAAAAGTT TAG
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| Protein sequence | MQHTQAGSRL GKAFRLFIMA VSGTEKEFTS GNINRAIFLL SVPMILEMVM ESLFAVVDIF
FVSKLGKHAI TTVGLTESIM TLVYTAAFGL SMAATAVVAR RTGEKDNDAA AHTAVQSLYV
ALVLAVIIAF IGIVFASEIL ALMGASDEVI YNGYIYTQIM LGGNLIVILI FLINGIFRGA
GDAAVAMRSL WIANILNILL CPLLINGFGP VPALGLKGAA LATTIGRGIG VCYQLYHLFG
GKGLIKINSR HLLPDMSVII RLLKIAAGGT AQLLINTASW IFLVRLIARF GEDAVAGYTI
AVRIIIFTLL PASGMANAAA ALVGQNLGAG QPDRAETSVW RAAFFNMLFL GFVSVFFLLA
ARPIVMLFTQ DTGIIAYAAQ CLQLVSVGYI FYAYGMVLSQ SFNGAGDTRT PTLINLVGFW
MLQVPMAWMM AVNYNMGPAG VFWAIAIAES CVAVAAIFIF RKGWWKRVKV
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