Gene Cpin_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0529 
Symbol 
ID8356635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp629151 
End bp630353 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content45% 
IMG OID644962675 
Productcytochrome c class I 
Protein accessionYP_003120228 
Protein GI256419575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGT CCTTATCAGT AAGGGCAGCA GATGCAGGCA AGGGTAAAAC ATTGTTTCAG 
CAGAATTGCG CCAGCTGCCA TAATGTTCAC AAACAAGTTA CTGGTCCTGC ACTGAAGGGT
GTGGAGGAAC GTTGGTCTGA TAAGAAATTA TTGCACCAAT GGATTCATAA CTCATCTTCT
GTGGTAGCTT CAGGTGATGC TTATGCTGTT AAACTCTTCA ATGATTTTAA CAAGCAGGTA
ATGCCTGGTT TCCCTGCATT TACAGATGCT GATATCGATG ACATCCTGGC TTACATCGCT
GATGAAAGTA CCAAAGAAGT TGGTCCTAAG AAAGGAGATG GTCCAACTCC TGGTGGTAGT
ACTGAAGATG GCGGTAACAA CAGTCTGCTG TTTGGTATCA TCACACTGAT CCTCGCTATC
GTTGCGCTGA TCCTGATGCA GATCAACAGT AACCTGAACA AGCTTGCTGG TGATAAAGAC
GGTGTACCTA CTCCGGATCC GGTTCCTTTC TACAAGAACA AAGCTTACAT CGCCCTGGTG
ATCCTGCTGC TGTTCATCGT AGGTGGTTAC TATACAATCA ATGGTGCGAT CGGCCTGGGT
CGTCAGAAAG ACTACATGCC AGAGCAACCC ATCTTCTACT CTCACAAAGT TCACGCAGGT
GTTAACCAGA TCAACTGTCT GTATTGCCAC GCGGGTGCTG AGAAGAGTAA GCATGCTATG
ATTCCTTCTG AGAATATCTG TATGAACTGT CACAAGACTA TCAGTGAGTA TGGTGGTGCT
GACCTGTACA CTGCAGAAGG TAAGAAGGTA AATGGTACTG CAGAAATCCA GAAATTATAC
GATCATGTCG GTTGGGATAA GAAAGCACAG GCTTACACTA AACCTGGCAA ACCAATCCAG
TGGACCAGAA TCCACAACCT GCCTGATCAC GTTTACTTCA ACCACTCTCA ACACGTAGTA
GCTGGTAAAC AACAGTGTCA GACCTGTCAC GGTGCGATCA CTGAGATGGA CGAAGTTCAT
CAGTTTGCTG AGCTGTCAAT GGGCTGGTGC GTAAACTGTC ACCGTACAAC TAAAGTGCAG
TTCGCAGATA ATAAATATTA CAGCATTTTT GAACAGTTCC ACCAGCAGGT GAAAGAAGGC
AAGATCGACA GCGTAACCGT TGAGATGGTA GGTGGTACTG AATGTCAGAA ATGTCACTAT
TAA
 
Protein sequence
MIASLSVRAA DAGKGKTLFQ QNCASCHNVH KQVTGPALKG VEERWSDKKL LHQWIHNSSS 
VVASGDAYAV KLFNDFNKQV MPGFPAFTDA DIDDILAYIA DESTKEVGPK KGDGPTPGGS
TEDGGNNSLL FGIITLILAI VALILMQINS NLNKLAGDKD GVPTPDPVPF YKNKAYIALV
ILLLFIVGGY YTINGAIGLG RQKDYMPEQP IFYSHKVHAG VNQINCLYCH AGAEKSKHAM
IPSENICMNC HKTISEYGGA DLYTAEGKKV NGTAEIQKLY DHVGWDKKAQ AYTKPGKPIQ
WTRIHNLPDH VYFNHSQHVV AGKQQCQTCH GAITEMDEVH QFAELSMGWC VNCHRTTKVQ
FADNKYYSIF EQFHQQVKEG KIDSVTVEMV GGTECQKCHY