| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0521 |
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| Symbol | |
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| ID | 8356627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 617637 |
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| End bp | 618539 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962667 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_003120220 |
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| Protein GI | 256419567 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.043939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAGAG AAAACTCGAT AAAATTGTCG ACATCGTATG CAGTAGCCAG TAAGGTGAGG
GATTATTCTC AGTTGATGAA GTTTAATCTC ACCATCATGG TAGTGTTTTC AAGTGTAGTG
GGATATCTGC TGGTGCCGGG AATCGGGTTC AACCTCGTAA AAGTTCTTAC TTTATTTGCC
GGTGGATTGC TGGTGTCTGG CGCAGCCAAC ACAATCAATC AATTACTGGA AAAGGAAACG
GATAAACTGA TGGCGCGTAC AGCTGTACGT CCATTACCGG CCGGCCGGAT GTCTGAAACA
GAAGCTATTA TCTTAGCTGT TGTTACAGGA GTATCCGGTC TGGTTATCCT TGCACTGGGC
TTTAACCTGT TATGTGCGGG TCTGAGTCTG CTGTCCCTGG TGTTGTACGG TTTCGTATAC
ACACCCTGGA AGAAATGGAA CTCACTGGCA GTGCTGGTGG GTGCGGTGCC TGGAGCGTTA
CCCCTGCTCA TTGGATGGGC GGGTGGTGCT AACGAAATCG GTAATGGCGG ATGGGCTTTG
TTTGCAATTC AGTTCCTGTG GCAGTTCCCC CACTTCTGGG CTATCGCCTG GATCGGGCAT
AAAGACTACA CAAGAGCAGG ATTCAAACTG TTACCTGCCG GAGGAGAACC TAACAAGCTG
ATTGCATTAC AGGCAGTGCT GTATACATTA CTGCTGATTC CTGCAGGATT ATTACCATAT
TACCTGGGTA TCAGTGGTCA AAGTTCTGCG ATCATTGTAT TGCTGGTGAC ATTGTTCTTC
CTGTACAGAG CAATCAATCT GTATAGAAAA GCAGATGTGC CTGCAGCACG CAAGCTGATG
TTTGGTTCAT ATATTTATCT GATGATCATG CAGTTTGCAC TACTGTTTGA TAAGATCGGG
TAA
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| Protein sequence | MIRENSIKLS TSYAVASKVR DYSQLMKFNL TIMVVFSSVV GYLLVPGIGF NLVKVLTLFA
GGLLVSGAAN TINQLLEKET DKLMARTAVR PLPAGRMSET EAIILAVVTG VSGLVILALG
FNLLCAGLSL LSLVLYGFVY TPWKKWNSLA VLVGAVPGAL PLLIGWAGGA NEIGNGGWAL
FAIQFLWQFP HFWAIAWIGH KDYTRAGFKL LPAGGEPNKL IALQAVLYTL LLIPAGLLPY
YLGISGQSSA IIVLLVTLFF LYRAINLYRK ADVPAARKLM FGSYIYLMIM QFALLFDKIG
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