Gene Cpin_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0513 
Symbol 
ID8356619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp612131 
End bp613396 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content50% 
IMG OID644962659 
ProductChloride channel core 
Protein accessionYP_003120212 
Protein GI256419559 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAGA ATATCCGGGC CTTTGTAAAA GAAGGCATCC CCCTGATGGA TACTGCCGGA 
CTGCACAAAC CACTGTCTGA AAACCCCATC GGAAACAGAC ACCTACCCCT GTTGTTCCTG
TATGCATTAC TACTTGCCGC AGCGACCGCC TTCCTGCTGT TTGGATTGAT CTCCGTCATG
AATAGAATTC CGACTTATAG CGGGCTTCCT GGTGTATCCA GGGACCTGGA TGAAAGAGAT
TGGCTGCTGC TGTCTGCACC GGTTGTTATT GCCCTGCTGA CGCGTGGTAT ACTGTATTAC
GCAGGAGACG GCACAAAACG GATGTTAAGG CCATTTCAGG GAATTTTATT GATCAATTCA
GGTATTCCCC TTGGATTGGA AGGACCGCTT GCTGATATGC CCTTTGCGAT CGCAGCGCAT
GAAAAGCGTT CCAGGCAGAA AAAACGGATA CTGGCAGCAG CCTGTATGAC CAGCGGATTG
GCCTTCCTTT TCGGCGCTCC CCTGACGGCT GTAGCACTGG CTATTGAACT CCTGGTGATA
GAACTGAGCT GGATAGGTAT TGTGGCAATA GTACTGGGAG GTGGAACCGG TTTGCTTTGC
CGTTACTGCC TGATAGGAAC AGACCCTGTT TTTCTTACAC CGGACATACC GGCAGCCAGT
TTTCCGATGT TACTGGTATA TACCGGCACC GGCATACTGG TCGGTTTACT GGGTATGCTG
ACCAGGAGAA TGACAAATGG GGCAAAAAAG CTATTTAAAT GCCTTCCTTT TGATCAATTA
TGGTGGCCGG TAGTCGTGGC GATTATCGTG GGCATTACGG GCTATTTTAA GCCCGAATTA
GCAGGTGGTG GATATGAGCA TATCGATAGC CTGTTATTGG GCCGGATTAC CCTGCAATTT
CTTGTGGTGA TGATGATAGG AAAACTGCTA CTGCTGAGCA TCTGTATCGG CGGAGGGATA
CCTGGTAGTG CGATGACGCC CCTGGTTATT GCCGGTGGTG CAGCCGGACT CTTTATTACC
TTCCTGCTGC AATTCGCTTT TCCCGCATTA CATCTCAACT TTACCGTAGC GGCACTGGTG
GGTATGTCGG CCATGTTTGC GGCAGGTAAC CGGGTACTGA TCGCTCCTAT CCTCTTTGCG
ATAGAAACTA CACATGCGCT CCATGCGTTA TTGCCCGTGA TCTGTGCTTG TACGGCTGCT
TATGCGATGG TGTTCCTGCT GAGCAAAAAG AAAGATAGCC GCGCATACGA TATCTTAGGT
TCTTAG
 
Protein sequence
MRENIRAFVK EGIPLMDTAG LHKPLSENPI GNRHLPLLFL YALLLAAATA FLLFGLISVM 
NRIPTYSGLP GVSRDLDERD WLLLSAPVVI ALLTRGILYY AGDGTKRMLR PFQGILLINS
GIPLGLEGPL ADMPFAIAAH EKRSRQKKRI LAAACMTSGL AFLFGAPLTA VALAIELLVI
ELSWIGIVAI VLGGGTGLLC RYCLIGTDPV FLTPDIPAAS FPMLLVYTGT GILVGLLGML
TRRMTNGAKK LFKCLPFDQL WWPVVVAIIV GITGYFKPEL AGGGYEHIDS LLLGRITLQF
LVVMMIGKLL LLSICIGGGI PGSAMTPLVI AGGAAGLFIT FLLQFAFPAL HLNFTVAALV
GMSAMFAAGN RVLIAPILFA IETTHALHAL LPVICACTAA YAMVFLLSKK KDSRAYDILG
S