Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0513 |
Symbol | |
ID | 8356619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 612131 |
End bp | 613396 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644962659 |
Product | Chloride channel core |
Protein accession | YP_003120212 |
Protein GI | 256419559 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGAGA ATATCCGGGC CTTTGTAAAA GAAGGCATCC CCCTGATGGA TACTGCCGGA CTGCACAAAC CACTGTCTGA AAACCCCATC GGAAACAGAC ACCTACCCCT GTTGTTCCTG TATGCATTAC TACTTGCCGC AGCGACCGCC TTCCTGCTGT TTGGATTGAT CTCCGTCATG AATAGAATTC CGACTTATAG CGGGCTTCCT GGTGTATCCA GGGACCTGGA TGAAAGAGAT TGGCTGCTGC TGTCTGCACC GGTTGTTATT GCCCTGCTGA CGCGTGGTAT ACTGTATTAC GCAGGAGACG GCACAAAACG GATGTTAAGG CCATTTCAGG GAATTTTATT GATCAATTCA GGTATTCCCC TTGGATTGGA AGGACCGCTT GCTGATATGC CCTTTGCGAT CGCAGCGCAT GAAAAGCGTT CCAGGCAGAA AAAACGGATA CTGGCAGCAG CCTGTATGAC CAGCGGATTG GCCTTCCTTT TCGGCGCTCC CCTGACGGCT GTAGCACTGG CTATTGAACT CCTGGTGATA GAACTGAGCT GGATAGGTAT TGTGGCAATA GTACTGGGAG GTGGAACCGG TTTGCTTTGC CGTTACTGCC TGATAGGAAC AGACCCTGTT TTTCTTACAC CGGACATACC GGCAGCCAGT TTTCCGATGT TACTGGTATA TACCGGCACC GGCATACTGG TCGGTTTACT GGGTATGCTG ACCAGGAGAA TGACAAATGG GGCAAAAAAG CTATTTAAAT GCCTTCCTTT TGATCAATTA TGGTGGCCGG TAGTCGTGGC GATTATCGTG GGCATTACGG GCTATTTTAA GCCCGAATTA GCAGGTGGTG GATATGAGCA TATCGATAGC CTGTTATTGG GCCGGATTAC CCTGCAATTT CTTGTGGTGA TGATGATAGG AAAACTGCTA CTGCTGAGCA TCTGTATCGG CGGAGGGATA CCTGGTAGTG CGATGACGCC CCTGGTTATT GCCGGTGGTG CAGCCGGACT CTTTATTACC TTCCTGCTGC AATTCGCTTT TCCCGCATTA CATCTCAACT TTACCGTAGC GGCACTGGTG GGTATGTCGG CCATGTTTGC GGCAGGTAAC CGGGTACTGA TCGCTCCTAT CCTCTTTGCG ATAGAAACTA CACATGCGCT CCATGCGTTA TTGCCCGTGA TCTGTGCTTG TACGGCTGCT TATGCGATGG TGTTCCTGCT GAGCAAAAAG AAAGATAGCC GCGCATACGA TATCTTAGGT TCTTAG
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Protein sequence | MRENIRAFVK EGIPLMDTAG LHKPLSENPI GNRHLPLLFL YALLLAAATA FLLFGLISVM NRIPTYSGLP GVSRDLDERD WLLLSAPVVI ALLTRGILYY AGDGTKRMLR PFQGILLINS GIPLGLEGPL ADMPFAIAAH EKRSRQKKRI LAAACMTSGL AFLFGAPLTA VALAIELLVI ELSWIGIVAI VLGGGTGLLC RYCLIGTDPV FLTPDIPAAS FPMLLVYTGT GILVGLLGML TRRMTNGAKK LFKCLPFDQL WWPVVVAIIV GITGYFKPEL AGGGYEHIDS LLLGRITLQF LVVMMIGKLL LLSICIGGGI PGSAMTPLVI AGGAAGLFIT FLLQFAFPAL HLNFTVAALV GMSAMFAAGN RVLIAPILFA IETTHALHAL LPVICACTAA YAMVFLLSKK KDSRAYDILG S
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