Gene Cpin_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0449 
Symbol 
ID8356555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp533535 
End bp534905 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content47% 
IMG OID644962595 
ProductAldehyde Dehydrogenase 
Protein accessionYP_003120148 
Protein GI256419495 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC AGGAGATCTA TAACGTACAA CAGGCTTTTT TTGAATCGGG TAAAACCCTG 
TCATATAAAT TTCGCAGGCA GCAGCTTCGG TTGCTGAAAT CGGCTGTTAA AAGGCGGGAA
AAGGAGATTC TGGCCGCTTT GCAGGCTGAT CTGCATAAAC ACCCGGTAGA GGCATATAGC
AGCGAAATAG GTACCCTGTA TGTCGAAATC CGGCATATGC TCAGTCATCT GAGAGAATGG
ATGCGGCCGG AAAAAGTCAG CAGCCCGTTT TCGATGTATC CCAGTAAAAG CCGGATTCAC
CGGGTACCAC TGGGTCTCGT TTTTATTATC GCTCCCTGGA ATTATCCTTT TCAGCTGGTT
ATGGCTCCGC TGGTGGGTGC TATTGCAGGT GGCAACTGCG CGATTGTTAA ACCATCTGAA
CTCACACCAC ACACGTCCGC CGTCATCGCG GCATTAATAA AGGAAACTTT TGATCCCGCT
TATATTACTA CCCTGGAAGG AGATGGCGGT ACCGTTATTC CGGATATGAT GCGGCATCGT
TTTGATCATG TATTCTTTAC CGGCGGACCA TCTATTGGGC GTAAAATAAT GGAAATGGCC
ACTCCGCACC TGACACCTGT TACGCTGGAA TTGGGCGGTA AATCGCCCTG TATAGTGGAT
GAAAAGACTA ATATCCGGGT GGCGGCTAAG CGGATTGTAT GGGGGAAGTT CTGGAACGCA
GGGCAAACCT GTATTGCGCC GGATTATATA CTCGTGCATA TAAAGGTGAA AGATGAACTG
ATCGCCGCTA TGAAAAAAGC GATTGTACGG TTCTTCGGAG AGCAGCCGGC TGACAGCCCT
GATTACGCAC GGATCATTAA TGAAAAGCGT TTTAAAATAT TACAAACATA TATGACACAG
GGAGCTGTTG TTCATGGAGG GAAGGCAGAT GAAGGTAAGC TGTTTATGGC TCCTACCCTA
TTGGATAATG TATCCTGGGA TAGTCCGGTG ATGCAGGAGG AAATATTCGG TCCTGTTCTG
CCGGTAATTA CTTATACAAC TCTTGAGGAA GCGATGCGGT TAATCAGACA GCAGCCATAT
CCATTGTCGC TGTATCTGTT TACCCGCAGT AAAGCAACCG AAAAACTGAT CACAGAACAG
TTACGTTTCG GAGGCGCCTG TATTAACAAT ACACTGGGGC ATTTTACCAA TCCGGAACTG
CCATTCGGCG GGGTGGGTAA TAGTGGTATG GGACAGTATC ACGGGAAGTA CAGCTTCGAT
ACTTTTACCC ATCCTAAGAG TATCATGAAA ACCGGTACCT GGATTGATAT CGCTATGAAA
TATCCACCTT TCAGAAATAA ACTCTGGCTG GTAAAAAGAC TGCTGAAATA A
 
Protein sequence
MNTQEIYNVQ QAFFESGKTL SYKFRRQQLR LLKSAVKRRE KEILAALQAD LHKHPVEAYS 
SEIGTLYVEI RHMLSHLREW MRPEKVSSPF SMYPSKSRIH RVPLGLVFII APWNYPFQLV
MAPLVGAIAG GNCAIVKPSE LTPHTSAVIA ALIKETFDPA YITTLEGDGG TVIPDMMRHR
FDHVFFTGGP SIGRKIMEMA TPHLTPVTLE LGGKSPCIVD EKTNIRVAAK RIVWGKFWNA
GQTCIAPDYI LVHIKVKDEL IAAMKKAIVR FFGEQPADSP DYARIINEKR FKILQTYMTQ
GAVVHGGKAD EGKLFMAPTL LDNVSWDSPV MQEEIFGPVL PVITYTTLEE AMRLIRQQPY
PLSLYLFTRS KATEKLITEQ LRFGGACINN TLGHFTNPEL PFGGVGNSGM GQYHGKYSFD
TFTHPKSIMK TGTWIDIAMK YPPFRNKLWL VKRLLK