Gene Cpin_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0350 
Symbol 
ID8356455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp416277 
End bp417212 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content47% 
IMG OID644962496 
ProductCytochrome-c peroxidase 
Protein accessionYP_003120050 
Protein GI256419397 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT GGCTCATCAC AGGTTTGTTA GTGACCGCAT CTACCCTGCT GGCTTTTCAT 
TCAGAAGAAC CGCTGACGCG GGTGACCCTC GGAGAAAAAT TGTTTTTTGA TCCGGTATTA
TCGATGGACA GGACTGTCAG CTGTGCTTCC TGCCATAGGC CACAGTTTGC CTTTGCCGAT
ACGTCAACCT TCAGCAAAGG CATTCATGAC AAGCTCACCA AGCGAAATAC CCCTGCGCTC
ACGAACCAAA GTGGCCGGCC CAGCTTTTTC TGGGATGGAC GGGCCGCCAC ATTGGAGGAG
CAGGCAAAGC AACCAATCAT CTCTCCTGAT GAAATGGGAC TGCCCATTGA TGAAGCGGTA
AAGCGGTTGA ACGCGGACAG TACATATGTA CAGGCATTCA GAAAGATCTT TAACAGTGCA
CCTACTGAAA AAAATCTCCT GCAGGCACTG GCAGCTTTTG AACGTACGCT GGAAACAGCG
AACAGTCCTT ATGACAGATA CATCAACGGC GATGACAATG CCATCTCAGC TACGGCTGCT
CGGGGACGTT TGTTATTCAT CGGAAAGGCC AACTGTAACA ATTGTCATTC GGGTGAAGAC
TTCACTGCTG ACCGCTTCAA AAATATAGGA CTATACAACG GTACTACACT GAAAGATGCG
GGGCGTTTTG ATATCACTCA CGATAGTGCC CAACTGGGAT TCTTCAAGGT GCCAAGCTTA
CGTAATGTGG CTGTTACAGC GCCTTACATG CACAACGGAA TGTTCCGGAC ATTGCGTGAA
GTCATTGTAT ACTACAACAC ACCGGATGCA TTAATACATG ACGGTATAAA AAGGGATTTA
TCATTAAATA CGCCATTGAA CTTAACAGAC ACAGAAATAG ACGAACTGGA AGCTTTTCTT
AAGACACTTA CAGACGACCG TTTTATCAAC CAATAA
 
Protein sequence
MKKWLITGLL VTASTLLAFH SEEPLTRVTL GEKLFFDPVL SMDRTVSCAS CHRPQFAFAD 
TSTFSKGIHD KLTKRNTPAL TNQSGRPSFF WDGRAATLEE QAKQPIISPD EMGLPIDEAV
KRLNADSTYV QAFRKIFNSA PTEKNLLQAL AAFERTLETA NSPYDRYING DDNAISATAA
RGRLLFIGKA NCNNCHSGED FTADRFKNIG LYNGTTLKDA GRFDITHDSA QLGFFKVPSL
RNVAVTAPYM HNGMFRTLRE VIVYYNTPDA LIHDGIKRDL SLNTPLNLTD TEIDELEAFL
KTLTDDRFIN Q