Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0347 |
Symbol | |
ID | 8356452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 411955 |
End bp | 412824 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962493 |
Product | transcription factor jumonji jmjC domain protein |
Protein accession | YP_003120047 |
Protein GI | 256419394 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTGA AACCTGTAAC AGCCATCAGT GGGTACACCC GGGAACAGTT CACGACAGCA TATCTTACAC CCGGCATTCC GGTATTGATC AGAGATTTTA TTGAACCGGA CAGTGTAGCC CTGCAGAAAT GGAACTATGA TTACTTCCGG CAGGAAGCGG GAGAAGTAAT GGTAGGCATA CATAGTGAAG AAAATGCGCA CCTGGACAAG GCGACAAGTC AGCCAGGCGA AAAGATGAAA TTCGGCGATT ACCTTGACCT GATAGAATCA CGACCGACTG TAAGAAGATT ATTCCTTTTC AACCTGTTGC GTGAGCGACC GGATATCAAA AAGGAACTGA AGGTCCGGAA GATGGCAGAT AACCTGCTGA CCTGGTTACC TTTTTTATTC TTCGGGGGAG AAGGTTCTTC AGTACGGTAT CACTATGATA TTGATATGTC GCACGTATTC CTGTCACAGT TTCAGGGCGT GAAAAAGGTG TGGTTATTTC CTAATGAGCA ATCTGATCTC TTATATCGTT TACCATGGAA TTTTCACGGT ATTGCCGATC TGCGGAATCC GGATTATGAA GCCTTTCCTG CCTTACGGCA GCTAAGTGGA TGGGAATGTA CTCTGCATTT TGGAGAAACG CTGTATATCC CTTCCGGGTA CTGGCACTAC ATACAGTATG AAACAGCCGG ATATTCTGTG GCATACAGGG CATTGCCGGT CTCAATGTTG AAACGGGCAG TGGGGGTCAG AAATATCTTT ATTACCCGTC GTTTTGACGA CGCGATGCGC AGGATACTTG GTAAGAAATG GTTTGATTAT AAAATGAAGA CTGCTTACAG GAGAGCGGCA CGTGCAGTGG AAAGAGGAAA TTCCAGGTAA
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Protein sequence | MHLKPVTAIS GYTREQFTTA YLTPGIPVLI RDFIEPDSVA LQKWNYDYFR QEAGEVMVGI HSEENAHLDK ATSQPGEKMK FGDYLDLIES RPTVRRLFLF NLLRERPDIK KELKVRKMAD NLLTWLPFLF FGGEGSSVRY HYDIDMSHVF LSQFQGVKKV WLFPNEQSDL LYRLPWNFHG IADLRNPDYE AFPALRQLSG WECTLHFGET LYIPSGYWHY IQYETAGYSV AYRALPVSML KRAVGVRNIF ITRRFDDAMR RILGKKWFDY KMKTAYRRAA RAVERGNSR
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