| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0304 |
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| Symbol | |
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| ID | 8356409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 350726 |
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| End bp | 351352 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644962450 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003120004 |
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| Protein GI | 256419351 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTGCATTG TCTACCTTCG GGTAAAACAC TTTTACGGCA CATTGGAACC ACTAAATGAC
CTTAAAACAG ACAGTGCCTT ACTTGAGCAG TACTTCCTTG AATACTTTGA GGTGTTGCAC
AACTATGCGT ATACGATCCT GAAAGATAAT GACGAGGCGA AAGATGCAGT ACAGGCAGTT
TTTATCCAGC TATGGCAGAA AAGAGAAAGC CTGCAGATCC GGCAATCTGT AAGGGCTTAT
CTCTACGCAG CCACTCACAA TCACTGCCTG AATCATATCA AAAGCAGTAA GATCCGGAAG
AAGCATTACG ACAGGTTTGC ATCCGGTATA TCATCCACCG GCATAACTGA TATCGAACAG
CAGATCGTCT TTGCCGATAT GAGAAAAGAA GTTCTCGAAG CCATGAAGGC CCTGCCTGAA
CGATGCCGGG AGATATTCTT TAAAAGCAGA TTCGAAGAAA AAAGTTATAA CGAGATAGCA
GCAGAACTGC AAATTTCTGT AAAGACAGTA GAAGCACAGA TGGGTAGGGC ATTACGCACG
TTAAGAACAA TCCTGTCCGA ACGAACTTTC AGTTGGCTGA TTATCAGTGC ACAACTGATC
TCCATCCTGA AAAATCTTTT TCACTAA
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| Protein sequence | MCIVYLRVKH FYGTLEPLND LKTDSALLEQ YFLEYFEVLH NYAYTILKDN DEAKDAVQAV
FIQLWQKRES LQIRQSVRAY LYAATHNHCL NHIKSSKIRK KHYDRFASGI SSTGITDIEQ
QIVFADMRKE VLEAMKALPE RCREIFFKSR FEEKSYNEIA AELQISVKTV EAQMGRALRT
LRTILSERTF SWLIISAQLI SILKNLFH
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