Gene Cpin_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0299 
Symbol 
ID8356404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp344204 
End bp345739 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content44% 
IMG OID644962445 
Producthypothetical protein 
Protein accessionYP_003119999 
Protein GI256419346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATAC AAGAAAGAAA TAAACTTAAA AGCTGGTTCG TAACAGGTGC ATATCCTGTC 
CAGAATCAAT TCTGGGATTG GCTGGATAGT TACATACACA AATCAGAAGA CCAGATATCA
ATCGAGAATG TAGCGTCGCT CAGAGACATC TTAAATCAAA AGGCGGATCA GGAGACTTAT
GCTGCCATGT TCAATCTTTA TCAGCAACTA TCAAATGATG CATTGTTAAA GAACACAGCC
TTTAGTGGAG AAGTAACCGG AACCTATGAT GCACTGCTAT TGAATAACGA TGCCGTAATT
GCAAAGGTGC TGGAAGGTCT TGACATCCCT GTTACACAGG AATACATCAG TGGAGCAGAT
ACAATACTGA CCGCCTTCGC CAAATTGCAG GGTCAACTGT ACAAAGCAGT AATACTGGAT
GAAAACAATA AGGTACCTGT TGAATATCTG CCAGCCATTG CGATCACCGA TGTGATGACA
GCAGCCAATG AAACGGAAAT GCTGGCATTA GATGCACAAC GTGGTGATGT TGCTGTAAGA
ACGGATGTCG CTAAAACATT CATTTTATCT ACCGATGATC CAACTGTACT CGTTGACTGG
AAAGAAATCA AAAGTGGTTT GTCCGTCCAG AGCGTAAACG GGAAAAGCGG TGTAGCAGTG
CAACTGAGTA CAAAAGATAT ACCAGAAGAG CAGAACGAGT ATTTTACAAA CGACCGTGCC
CGTGCAGCAT TTACTGCTGG TACAGGCATT AATGTTTCAG CCGGAGGAGA GATCAGTAAC
ACCCACAATA CATTACAGGC AGTTACTGAA AATGGTTTTG ATACAAACAA CAGAATGCGC
ATATCAGGCG CTGCCGGCGA TCTTGGGAAC GGCGAAGGCT TAGAATTACT TTACAGTAAC
AATGCAGCAG AAATCTTCTC CATTGACAGG AATCCGGGAG GCGGATATAA AAAACTGGCG
ATAAACGCTT CTACCTTACT GTTGAACAAT GAGCTCAGCG GACCGATCGG CCATGTACTC
ATCGGGAACG CTGCGCCGGA AGCCAAACTA GGCGTAGCCG GCGATGGTGT TTTTACCGGC
AATGTATCAG GTAGCGACGC AACAGATCCA CGACATTTTG TAACCTATCA GCAACTGAAT
AATCAATTTT CAGAAGGCCC GTGGACACCT GACTTCGGAG AACTGAACGC GCTTGTAAGA
TATGTCAGAG CATATTATGT AAGGAGCGGA AATAATGTAC GTGTGAGCTT ACAGTTTCAG
ATAGGAGAGG TACCTTATCC GCAATCTATT TACCTGATCT TTATAAAAGG ATTACCATTC
CCTGTAAGAG AGTTCGGTGT GACTTATTAT AGTGGATATT ACGGTACCAG CTTTGCTGAC
AGTCAGGTAC AACCCGGATC CGCCAATCAG CATCTCAATC TGGCTGTTAT AGTCTCCTCA
AATGGAGATG CAATTCGTTC TAACACGAAT GAGCGCTGGG GCGATGTACA AAATAAAACA
ATGGTGATTG ATATTACTTA TGTAACGACA GCATAA
 
Protein sequence
MAIQERNKLK SWFVTGAYPV QNQFWDWLDS YIHKSEDQIS IENVASLRDI LNQKADQETY 
AAMFNLYQQL SNDALLKNTA FSGEVTGTYD ALLLNNDAVI AKVLEGLDIP VTQEYISGAD
TILTAFAKLQ GQLYKAVILD ENNKVPVEYL PAIAITDVMT AANETEMLAL DAQRGDVAVR
TDVAKTFILS TDDPTVLVDW KEIKSGLSVQ SVNGKSGVAV QLSTKDIPEE QNEYFTNDRA
RAAFTAGTGI NVSAGGEISN THNTLQAVTE NGFDTNNRMR ISGAAGDLGN GEGLELLYSN
NAAEIFSIDR NPGGGYKKLA INASTLLLNN ELSGPIGHVL IGNAAPEAKL GVAGDGVFTG
NVSGSDATDP RHFVTYQQLN NQFSEGPWTP DFGELNALVR YVRAYYVRSG NNVRVSLQFQ
IGEVPYPQSI YLIFIKGLPF PVREFGVTYY SGYYGTSFAD SQVQPGSANQ HLNLAVIVSS
NGDAIRSNTN ERWGDVQNKT MVIDITYVTT A