Gene Cpin_0266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0266 
Symbol 
ID8356371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp315000 
End bp315905 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content42% 
IMG OID644962413 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003119967 
Protein GI256419314 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA AAACACATTA TCGCTCAGCA AACATTAGTG GCGTAGATAT CTTTTATAGG 
GAGGCGGGGC CTGCCAATGC ACCGGTGTTA CTGTTGTTGC ATGGTTATCC AACCTCTTCG
CATATGTATC GGAACCTGAT CAATGATTTG TCTGATCAAT ATCATTTGAT TGCCCCTGAT
TATCCGGGTT ATGGAAGAAG TGAACAGCCG CCTATGGCCG ATTTTGAGTA TAGTTTTGCA
AACTATGCCA GGATAATGGA AGCATTGCTG AAACATCTGA ATGTTGAAAA GTTCAGCCTT
TATCTGATGG ATTATGGCGC TCCCGTTGGC TGGACGCTCG CCTCAAAATA TCCGGATAGG
ATAGAGACTA TCATCGTACA GAACGGCTGT TGCTATGAAG AAGGATTAGA AACCTTCTGG
GATCCTATTA AGGCACTCTG GAAAGACAGG AATGATAAGG ATGCTATTAA GGCATGTCAG
GCATTCCATA GCCCCGATGG TTTGAAATGG CAATACACAC ATCATGTTCC GGATGAAAGC
GCTATATCTC CTGATAACTG GGAAATTGAT CTCAGGCACC TGCAGCGCCC TGAAAATGAT
GATATCCAGA TTGCATTGTT TTACGATTAT CGCAACAATG TAAAGCAGTA TCCTAAATGG
CAGGAATACT TACGTACCAG CAATCCGGAA ATGTTAATAG TATATGGAAA GGACGATTAT
ATTTTCCCTG GTGTTGGTGC AGAAGCATTT AAAAAAGATG TGAAGAATCT TGAGTTTCAT
CTTTATCCAA CAGGGCATTT TGCACTTGAA AGCTTTGGTG ATGAAATTAC CGCTACCATA
CGGGACTTTT TAGGCAGGAA ATTGAGTGGC CGTAAGGTAC AGAGCGCATT AACCGAATCA
GTATAA
 
Protein sequence
MENKTHYRSA NISGVDIFYR EAGPANAPVL LLLHGYPTSS HMYRNLINDL SDQYHLIAPD 
YPGYGRSEQP PMADFEYSFA NYARIMEALL KHLNVEKFSL YLMDYGAPVG WTLASKYPDR
IETIIVQNGC CYEEGLETFW DPIKALWKDR NDKDAIKACQ AFHSPDGLKW QYTHHVPDES
AISPDNWEID LRHLQRPEND DIQIALFYDY RNNVKQYPKW QEYLRTSNPE MLIVYGKDDY
IFPGVGAEAF KKDVKNLEFH LYPTGHFALE SFGDEITATI RDFLGRKLSG RKVQSALTES
V