Gene Cpin_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0247 
Symbol 
ID8356351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp297455 
End bp298498 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content46% 
IMG OID644962393 
ProductL-asparaginase, type I 
Protein accessionYP_003119948 
Protein GI256419295 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00519] L-asparaginases, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA TCCTGATTAT TTATACAGGG GGCACCGTTG GGATGATCTA CGACGAGAAA 
ACCAAAGCCT TGCGTCCTAT CGGTTTTAAT GAAATACGTA ACAATCTTCC GGAACTATAC
CGTATGGGGA TTGATTTTTA CGTATACGCT TTTAATCCGC CTATCGATTC TTCCGACATG
CAACCCGAAA TATGGGTGGA ACTGGCATCT ATTATCGAAG ACCGCTACGA CCGGTATGAT
GGATTTGTCA TCCTCCATGG CTCCGATACA ATGTCCTTCA CCGCTTCAGC ACTGAGCTTC
ATGCTGGAAA ATCTCTCCAA ACCTGTCATC TTAACCGGTT CGCAGTTGCC TATCGGGAAG
ATCCGTACAG ACGCCAAGGA GAATATTATC ACCGCTATGG AGATCGCTGC TACCCGTCAT
AACGGACAGG TAGTTGTGCC GGAAGTATGT ATCTATTTTG ACTTCGCGCT CTTCCGTGGT
AACAGGTCCA AGAAATATAA CGCAGAGAAA TTCGAAGCGT TCTATTCCAT GAACTATCCG
CCACTGGCTG AAGCAGGCAT CGACATCAAA TACAAAACAC AGTTTGTATT GCCTTGTCCT
GATAAGCCGC TCAAAGTACA TAAACACCTG GACGACAATG TCACCGTACT GAAAATGTTC
CCGGGTATCA CCCGTAAAGC AGTAGAGGCT ATCTTAAATG TAAGCGGCCT CCGGGGTGTA
ATCATGGAGA CCTTCGGTAG CGGTAATACC AATACACAAC CCTGGTTTAT CGAATGTCTG
AAAAAGGCAA TAGAGAAAGG AGTGATCATT GTGGATATCA CCCAATGTGA CGGTGGATCG
GTAGAACTGG GTAAATATGA AACCAGTCAG CCACTACAGC AGATCGGTGT GATCAGTGGT
CATGATATGA CCTTTGAAGC TGCGATCACC AAACTGATGT TCGTACTGGG ACAAGACCTC
GATCCGGCTT CTACAAAAGC AATGATCGAA ACCTCTCTGA GAGGGGAGTT GACGGCTAAT
ACCAACGACT GGGAATCGAT TTAA
 
Protein sequence
MSKILIIYTG GTVGMIYDEK TKALRPIGFN EIRNNLPELY RMGIDFYVYA FNPPIDSSDM 
QPEIWVELAS IIEDRYDRYD GFVILHGSDT MSFTASALSF MLENLSKPVI LTGSQLPIGK
IRTDAKENII TAMEIAATRH NGQVVVPEVC IYFDFALFRG NRSKKYNAEK FEAFYSMNYP
PLAEAGIDIK YKTQFVLPCP DKPLKVHKHL DDNVTVLKMF PGITRKAVEA ILNVSGLRGV
IMETFGSGNT NTQPWFIECL KKAIEKGVII VDITQCDGGS VELGKYETSQ PLQQIGVISG
HDMTFEAAIT KLMFVLGQDL DPASTKAMIE TSLRGELTAN TNDWESI