Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0231 |
Symbol | |
ID | 8356335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 276859 |
End bp | 277593 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962377 |
Product | ABC transporter, permease protein |
Protein accession | YP_003119932 |
Protein GI | 256419279 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03518] gliding motility-associated ABC transporter permease protein GldF |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGCAA TTTTTAAAAA AGAAATACAT CAGTTTTTCA GCAGCATAAC CGGATATGTC GCCATCATCC TATTTCTGCT GGCCAACGGC CTGCTGTTAT TCGTTTTTCC CGATACCAGT CTGCTTGATT ATGGATACGC TAATCTCGAC CCGCTTTTTG AGCTGGCGCC CATGATCTAC CTGTTACTCA TTCCCGCTAT TACCATGCGT AGTTTCGCGG ATGAATTCAA ATCCGGCACC ATGGAGCTGT TAAGCACGAA ACCATTGAGC TGGTGGCAGA TCGTCGGAGG AAAATTTACA GCTGGTCTTG TAGTCGTACT GATCTCACTG ATCCCTACTG TTGTTTATTA TATCGCAGTC AGACAACTGA GTGCCGATCC CGCTAATCTT GACAACGGTG GCATGGCAGG TTCCTATATC GGCCTGTTTT TATTGGGCGC TGTATTCACC GCTGTAGGTG TATGGTCATC TTCCCTGACC AGCAATTCAG TAGTTGCCTT CCTCATTGCT ATTTTTACCT GTTTCATATT CTACAATGGT TTTGACGCGC TGAGCAAAGT ACCGGCCTTT TCCGGCAGCG CTGATTACTA CCTGCGTATG GCTGGTATCA AATTTCACTA CACGTCTATC AGCCGTGGGG TGATCGATAG CCGGGATATT ATTTATTTCC TGAGCATTAT CGGCCTGATG CTGTATCTGA CAAGATTATC ACTGCAACGC AGGATATGGG ACTGA
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Protein sequence | MLAIFKKEIH QFFSSITGYV AIILFLLANG LLLFVFPDTS LLDYGYANLD PLFELAPMIY LLLIPAITMR SFADEFKSGT MELLSTKPLS WWQIVGGKFT AGLVVVLISL IPTVVYYIAV RQLSADPANL DNGGMAGSYI GLFLLGAVFT AVGVWSSSLT SNSVVAFLIA IFTCFIFYNG FDALSKVPAF SGSADYYLRM AGIKFHYTSI SRGVIDSRDI IYFLSIIGLM LYLTRLSLQR RIWD
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