| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0184 |
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| Symbol | |
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| ID | 8356284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 230718 |
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| End bp | 231269 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644962327 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119886 |
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| Protein GI | 256419233 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.688137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATAC CTCAGGATGA TAAGGCATTA TTGGCAATAT ACCGCGACCC TGCCACAAGG
GAAAAGGGAT TTACGTATAT CATCCAGAAA TACCAGGAAC GCCTTTACTG GCATATCAGA
CGACTGGTAC TCGACCATGA TGACGCCAAT GATGTATTGC AGAATGTATT TGTAAAAGTC
TGGAAAAACC TGGAAGGATT CCGTGAAGAT GCACAACTTT ACACCTGGTT ATATAAGATA
GCCACTAATG AATGCCTCAC CTTCCTGGAA AAACAAAAGA AAAACAACTC AGTTTCACTG
TCAGATGTAG AAACTGGTCT TAGTAATACG CTGAAGGCAG ATGCCCAGTT TGACCCTAAT
AAACTGGAGT GGAAACTGCA AAAGGCAATT CTGGGACTGC CTGAAAAACA AAGGATTGTA
TTCAATCTGA GGTATTATGA TGAAATGCCC TATGAAGAAA TGAGCCGTGT TCTCGACACC
TCAGAAGGCG CACTCAAAGC ATCCTACCAT CACGCCGTAA AAAAGATCGA AGAGTTCATC
CGAAATAGCT GA
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| Protein sequence | MSIPQDDKAL LAIYRDPATR EKGFTYIIQK YQERLYWHIR RLVLDHDDAN DVLQNVFVKV
WKNLEGFRED AQLYTWLYKI ATNECLTFLE KQKKNNSVSL SDVETGLSNT LKADAQFDPN
KLEWKLQKAI LGLPEKQRIV FNLRYYDEMP YEEMSRVLDT SEGALKASYH HAVKKIEEFI
RNS
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