Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0109 |
Symbol | |
ID | 8356208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 134350 |
End bp | 135579 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644962253 |
Product | drug resistance transporter, Bcr/CflA subfamily |
Protein accession | YP_003119813 |
Protein GI | 256419160 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCC GGCAGTATTG GTCCCTGATT TTAATCCTGG GAACCATGAC CGCATTAGGG CCATTTTCAA TAGATATGTA TCTGTCCGGA TACCAGGCCA TCGCAGAAGA CCTGCATGTC CCTACAGAAC GCATCGGGTT ATCACTCGCC AGTTACTTTA TCGGTATCTC TGCGGGACAA TTACTATACG GCCCCTTACT GGATCGTTTT GGCAGAAAGA AACCGCTTTA TGCCGGACTG ATCGTCTACC TGATCGCCTC TGCAGGATGT ATTGCGGCAA GATCACTGGA GTCTTTTGTA CTCCTGCGCT TTATTCAGGC CATCGGTAGC TGTGCGGCGG CTGTAGCCTC TGTTGCCATG GTACGCGACT TATTCCCGAT AAAAGACAGT GCAAAAGTTT TCGCACTACT TATGTTAGTA GTAGGCGCCT CTCCTATGCT GGCTCCGACC ATTGGTGGCT ATATTACAGC TGCCTGGAAC TGGCAGGCTA TCTTTATCGT ATTGGGTGGG ATGGGGTTAC TGCTGATGAT CGCCTGCTTT GCCTTTCTGC CTGAAAGCCA TCAGCCGGAT ACTTCCATGT CACTGAAACC GGGTCCTATT ATCAACGGAT TCTGGGCCGT GATGCGGGAA CCACAATTCT ATACCTATGC ACTGACGGGT GCATTTGCAT TCTCCGGCCT GTTTGTATAT GTATCGTCTT CCCCCGTGGT ATTCATGAAT ATCTTCCGTG TATCTGAAAC ACATTTCGGA TGGATCTTCG CGGGATTATC CGTTGGGTTT ATCGGTTCCA GTCAGCTGAA CAGTCTGACC TTACGCTATT TCCGCAGTGA ACAGATCATC CGTATTGCAC TGATAGGACA GGCACTGATC GGTATCGTTT TCTTTGCCGG CAGTTACCTG GGATGGTTCG GACTGACATC GACGATTATT ATGTTATTCC TCTATCTGAG CTGTCTGGGA TTTGCCAATC CGAATGCGTC TGCACTGAGT ATCGCACCGT TTAAGAAAAA TGCAGGTACC GCAGCGGCAC TGATGGGCGC ATTACAGATG GGTATCGGCG GACTGGCTTC CACCGTGGCC AGTTTGTTCC ATGCAACATC TCCTGTTCCT ATGACCATGC TGATGGCAGC AACAGCACTG ATATCAGTTG CTATATTGTT CCTGGGAGGA TTACGTATTA CCAATCCCGT TTTCCTGCAT GATGGCGGCG ATACGGTAGT ACTCCACTAA
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Protein sequence | MPARQYWSLI LILGTMTALG PFSIDMYLSG YQAIAEDLHV PTERIGLSLA SYFIGISAGQ LLYGPLLDRF GRKKPLYAGL IVYLIASAGC IAARSLESFV LLRFIQAIGS CAAAVASVAM VRDLFPIKDS AKVFALLMLV VGASPMLAPT IGGYITAAWN WQAIFIVLGG MGLLLMIACF AFLPESHQPD TSMSLKPGPI INGFWAVMRE PQFYTYALTG AFAFSGLFVY VSSSPVVFMN IFRVSETHFG WIFAGLSVGF IGSSQLNSLT LRYFRSEQII RIALIGQALI GIVFFAGSYL GWFGLTSTII MLFLYLSCLG FANPNASALS IAPFKKNAGT AAALMGALQM GIGGLASTVA SLFHATSPVP MTMLMAATAL ISVAILFLGG LRITNPVFLH DGGDTVVLH
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