Gene Cpin_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0100 
Symbol 
ID8356197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp119379 
End bp119909 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID644962244 
Producthypothetical protein 
Protein accessionYP_003119806 
Protein GI256419153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.674654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCG AGATACTTGA ATTCCTGCCT CCATATGGCC CTATGCCAAT CGCCGTCACC 
GAAGACGGTT CCTCCTACTA TTCCGCAGGC TTTCCCGTGC GGTTCTTCAG AACAGATGGA
ACGGACTGGG TAGGCAACTT TGCACCGGGA TCTACAAAAT ACAACGAAGT ACTCCCACTC
AGAGACTCAG CGCATATACT TGTCATTGCA GGTGGAATCT GTTATGTCAT GCACCCGGAT
CATACATCTC CTGTAGAGTC ATTCGGGGAG TATTATGTAA ATGCTATTCC AATGGAAGAT
GGCCGTATCA TATTACAGGG CAACAGCCAT CTCAGTATTA TACACCCTGA TGGCACACAT
TGGAATACGG GCGCTATTTC TTTCTGGGAC TTTAAAGAGC TGCGTGTCAA GGGTAGTATT
ATAACTGGTC TGGCCATGAC ATACACAGGC TATTACGAAG ATGTATTTGT ACCTTTTACG
TATGATATTG ATACAAAAAC GCTGACGGAG AAAGAGTATA TATGGGAATA A
 
Protein sequence
MRFEILEFLP PYGPMPIAVT EDGSSYYSAG FPVRFFRTDG TDWVGNFAPG STKYNEVLPL 
RDSAHILVIA GGICYVMHPD HTSPVESFGE YYVNAIPMED GRIILQGNSH LSIIHPDGTH
WNTGAISFWD FKELRVKGSI ITGLAMTYTG YYEDVFVPFT YDIDTKTLTE KEYIWE