Gene Cpin_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0067 
Symbol 
ID8356164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp83951 
End bp84619 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID644962212 
Productprotein of unknown function DUF1345 
Protein accessionYP_003119774 
Protein GI256419121 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATA ACGTTTTTGT CAAATTACAT CCCATCCATC GCGTCCTTAT CAGTGCCGGC 
CTCGCCGGAG CCGTATTTCT GCTCACACAG GCAGTCTCCC TGACGCCACT CATACGGGGC
GTACTCCTAT GGGACGTATT TGCCCTTGTC TACAATATCA CCTGCTGGGT GGTCATTTTC
AGCCGTTCTG TAGAGGAAAT ACGGAAATAT GCGCGTACCG AAGATGGCAG CCGCATCTTT
GTATTCATTG TCATCTTATT GGCGTGTTTT GCCAGTATGC TGATGGTATT ATTGCTGATG
TTGTCTGATG AAGCCCAGGA CGCGGGAAAA ATATTGTATG TGGTGGTAGC CGTAGCCGGG
ATACTGCTAT CATGGGCAAT GGTACATACC ATGTTCACCT TTCATTATGC GCATATCTAC
TATGATGACG ATGAAAATGA TGCGAAGAAA CATGCCGGCG GCCTGGAATT CACGAAAGAA
CAGCATCCCG ATTACCTGGA TTTCGCCTAT TTCTCTTTTG TAATAGGAAT GACATTCCAG
GTATCTGATG TGGAGATCAG CGCACGCAAA CTACGCCGTA TAGGATTGCT GCATGGCCTG
ATCTCTTTTT TGCTGAATAC CTTTATAGTC GCTATGACAA TCAACATCAT CGCCGGACTA
AAAAACTAA
 
Protein sequence
MRNNVFVKLH PIHRVLISAG LAGAVFLLTQ AVSLTPLIRG VLLWDVFALV YNITCWVVIF 
SRSVEEIRKY ARTEDGSRIF VFIVILLACF ASMLMVLLLM LSDEAQDAGK ILYVVVAVAG
ILLSWAMVHT MFTFHYAHIY YDDDENDAKK HAGGLEFTKE QHPDYLDFAY FSFVIGMTFQ
VSDVEISARK LRRIGLLHGL ISFLLNTFIV AMTINIIAGL KN