Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0067 |
Symbol | |
ID | 8356164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 83951 |
End bp | 84619 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962212 |
Product | protein of unknown function DUF1345 |
Protein accession | YP_003119774 |
Protein GI | 256419121 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAATA ACGTTTTTGT CAAATTACAT CCCATCCATC GCGTCCTTAT CAGTGCCGGC CTCGCCGGAG CCGTATTTCT GCTCACACAG GCAGTCTCCC TGACGCCACT CATACGGGGC GTACTCCTAT GGGACGTATT TGCCCTTGTC TACAATATCA CCTGCTGGGT GGTCATTTTC AGCCGTTCTG TAGAGGAAAT ACGGAAATAT GCGCGTACCG AAGATGGCAG CCGCATCTTT GTATTCATTG TCATCTTATT GGCGTGTTTT GCCAGTATGC TGATGGTATT ATTGCTGATG TTGTCTGATG AAGCCCAGGA CGCGGGAAAA ATATTGTATG TGGTGGTAGC CGTAGCCGGG ATACTGCTAT CATGGGCAAT GGTACATACC ATGTTCACCT TTCATTATGC GCATATCTAC TATGATGACG ATGAAAATGA TGCGAAGAAA CATGCCGGCG GCCTGGAATT CACGAAAGAA CAGCATCCCG ATTACCTGGA TTTCGCCTAT TTCTCTTTTG TAATAGGAAT GACATTCCAG GTATCTGATG TGGAGATCAG CGCACGCAAA CTACGCCGTA TAGGATTGCT GCATGGCCTG ATCTCTTTTT TGCTGAATAC CTTTATAGTC GCTATGACAA TCAACATCAT CGCCGGACTA AAAAACTAA
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Protein sequence | MRNNVFVKLH PIHRVLISAG LAGAVFLLTQ AVSLTPLIRG VLLWDVFALV YNITCWVVIF SRSVEEIRKY ARTEDGSRIF VFIVILLACF ASMLMVLLLM LSDEAQDAGK ILYVVVAVAG ILLSWAMVHT MFTFHYAHIY YDDDENDAKK HAGGLEFTKE QHPDYLDFAY FSFVIGMTFQ VSDVEISARK LRRIGLLHGL ISFLLNTFIV AMTINIIAGL KN
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