Gene Cpin_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0065 
Symbol 
ID8356162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp81398 
End bp82597 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content48% 
IMG OID644962210 
Producthypothetical protein 
Protein accessionYP_003119772 
Protein GI256419119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACGC CATTGTTACC GCTGCAACAG CTGCTGGACA GCTTGCAGCA CCCGCCACAA 
ACCGACGATC CGGACGCCTA TGAAATTGCC AGTTTTATGC ACAGACAATC CCTTGCCGCT
ATAGAAGATA TTACCCTCGC TTTTGAAGAA TGCCTCGCCG CAGGTGTCAG CGAACCCACC
ATCAGAAAAT ATGTAAGCAT CTGCCAGGAA AAGATCACTG CGCTTTGTAA TGACGTCCCC
TTCAACTGGC TCGAAGTAGA AACCGCAGCC CCCGTAGAAT ACGACGAGTG GCGCTACCTC
TGCAATGACC TCTGTCACCA GCTGGAAGAC CTCATTCTCT ACCTTATGTT TACCTATGCC
AAGTACTATA ACAAAATGGC AATCACGCCC AACGTGTACC GGGAACTGAT GCGGCAACGC
ATCGCTCCCG GTCTTTCCGT CATCCGGAAC TGGTTTAGTG AAACGGATGA AAGTTGCCGG
GAATTACAGC AGATGATCCT CAGCCTGTAC GACGCCTTTG ATCCGGAAAC GCCCAACAGG
ATGAACCACT ATCAGCTCGA TTTTCTCCGC GAACTACAAC AAGCCCTCCT GAAATATTGG
GCACAGGAAG ATAATACGCT CGATCACGGC TCACTACAGC AATTGCTGTT CACACTCAAC
TACAACAGCA CCGACTATTA TCATTATTGT ACCTCCTATA TCAGCCAGCA GTTAATGGAA
TTACCCGACG CACACACGCA ACTGGACCTG CTGTCCTTTA TCCATAAAAC ACTCTGCCAG
TTGCCTGTAA AAACCGGACT AGCCTATAGT CACGACGCGC CCTCCATCAT CTCCCTGCTG
AAAGAATGGC TACAGGTAGA AACAAGACAC CTGCAGATCA AACTGAAACG CAGTTCTTCC
GGCAGCGTGA AGAAATTCAA AAGCCTGCCT GAAAATTTCA AATTGCAAAC TTCCCTGACA
CTACCGGAGC TGGCAGCCTT ATTCAGGATA TTAAAAGAAG CGGGAATTGT GGAAAACAGG
AACATGCAGG ATGTGTTCCG GGTCATTTCC CTCTGCTTCT CCATTCAAAA GAAAGAAGCA
TTCGAAGGAA ACTTATTCCA GTCACATTAC TACCACATTT CTCCGGAAAC TTATAAAAAG
ATGGAAGATC TGGCACACTC CCTTGTCAGG AAAACCTTCC AGCTGAGAAA GGAACAGTAA
 
Protein sequence
MRTPLLPLQQ LLDSLQHPPQ TDDPDAYEIA SFMHRQSLAA IEDITLAFEE CLAAGVSEPT 
IRKYVSICQE KITALCNDVP FNWLEVETAA PVEYDEWRYL CNDLCHQLED LILYLMFTYA
KYYNKMAITP NVYRELMRQR IAPGLSVIRN WFSETDESCR ELQQMILSLY DAFDPETPNR
MNHYQLDFLR ELQQALLKYW AQEDNTLDHG SLQQLLFTLN YNSTDYYHYC TSYISQQLME
LPDAHTQLDL LSFIHKTLCQ LPVKTGLAYS HDAPSIISLL KEWLQVETRH LQIKLKRSSS
GSVKKFKSLP ENFKLQTSLT LPELAALFRI LKEAGIVENR NMQDVFRVIS LCFSIQKKEA
FEGNLFQSHY YHISPETYKK MEDLAHSLVR KTFQLRKEQ