| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0057 |
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| Symbol | |
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| ID | 8356154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 68586 |
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| End bp | 71630 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962202 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003119764 |
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| Protein GI | 256419111 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATGC CCGAACGCAC AAAATGCTGT ACGCTCTTCC TCCTGCTCTA TACCTGTTGT
TTGTTGCAGG TACATGGACA GCAGGGACGA AACAGTGTAT CCATCAGTGG CCGGCATTTA
TCGCTGCAAC AGCTCTTCAA CAAGATCCAG GAACAGACCA GCTATTACTT CAGTTACGGC
GCAGATGTCG ACCTTTCCCG CACCATAAAT GTCGATTTCA AACAAACAAC ACTGCAAACT
GTCTTGAACA CTATCCTGGC AAAAGACTAC TCCTGGGAAT TCGACGGACG CTCCATCAAC
ATCCGGATGA TCCCATCTAC AACACTACCA CCCAACCCTA CTCATACACC CGTCTCAGAC
AGTCCTACAC TGATCCAGGG AAAGGCGCTG GATGAAACGG TCATCATCGC CTATGGTACT
ACCACACATC GTTTTAATAC TGGTAATGTC ACGGCTATCA AAGGCGAAAG TATCGCCGGA
CAGTCAGGCA CTAACCCGCT ATTAGCCCTA CAAGGGCGTG TACCCGGCTT GCTGGTCACG
CAAACAGGTG GTATTGGTGG TATGGCGATG AAAGTCCAGC TCCGGGGTCA AAACAGCCTT
GAAAATGGTA CACAACCTTT ATTTATTATT GATGGTATTC CTTATAACCC TATCCTCAGC
GGCGGACTCG GATCGCAGAT CTGGGGTGAA AAAGCATCCG CTTTTAATTT TATCAATCCT
GAAGACGTTG AAAGCATCGA TGTATTGAAG GATGCGGATG CAACCGCTAT CTACGGCTCC
CGTGGCGCCA ACGGTGTGAT CCTGATCAAT ACCCGCAAAG GGAAAGCAGG TAAGACGGTG
CTTCGATTCA ATATAGCCAC TGGCCTCACC CATACCGGCC GTCATGTGCA GCTGCTCAAT
ACCCAGCAGT ACCTGGAAAT GAGAAATGAA GCATTCAGGA ATGACGGTGT TAAACCAACC
GAACGCAATG CCCCTGATCT GCTAAAATGG GATCCTGCGC GTTATACCGA TTGGCAAAAA
GCACTCATTG GCGGTACTGG TAAGAACATC AGCACTCAAG CTTCTATGTC GGGAGGCAGC
AACACTTACC AGTACTTAAT AAGCGGGCAC TACCGCCGCG AGACTATGGT ATTCCCTGGT
TCGTTTGCAG ATACACGTGG CGGACTTCAT CTCAGTACAA ACGCGAACTC CACCGACCAA
CGCTTTTCTG CCACTTTTAC CGGGAGTTTT CTGGCAGATA AAACGACACT TCCGGGCTTT
GATTTTACCA GCAGTATACT ATTACCTCCT AATACTCCTC CCGCCTACCT GGAGGACGGT
AGCCTCAATT ACAGCTGGTT AAACCCCTAT ATCGGATTGG TCGGGCCTTT ATTTAATGCG
GATGTAAAGA ACCTGCTGGC AAATATCGGC TTGCAATACC GGCTTTTACC TGGATTAGTC
CTAAAAACAA ATGTGGGTTA TAACTGGCTT ACTGGTCGCT CTAGCTCATT GACGCCACTC
GCCATCTATG CGCCTGCTAT TCGTAATACA CGTACAGGGT CTTCCCAGCA TTTTCACTAT
GAAGGCATCT CCCGCATCAT TGAACCACAG GCTACCTATA CCCTTGATAA ATGCGCTTGG
CACCTGCAAT TCCTCGCAGG TGGTACGCTC CAGGGATATA ACGAAAACCA GGATGCACTA
TACGCGGATG GATTTAAAAG TGATGCGCTC TTAAACAATA TCTATTACGC CGATACCGTA
TATGGCAAAA CAGAAACGGC CGCATACCGT TATGTCGCGC TCTTCGGCCG GATGGGGATC
AACTATAAAA ACCGTTATCT GCTTAATCTC AGCGTACGCC GCGATGGCAG CAGCCGTTTC
GGTCCGCGTA AACAGTTTGC TTCCTTTGGC GCCATCGGCG CTGCCTGGAT CTTCACGGAG
GCGCCTTTTG CAAAGCCTTT ACAGCGCATC CTGAGCTTCG GTAAACTACG TGCCAGTTAC
GGTACAACCG GTAATGATCA GATAGGCGAT TATCAATATC TCGGGCAGTA TAAGAACGTG
GATGGTACTT ATCAGAACGT TACCGGACTC CGGCCTGCCA GTTTGTTCAA TGCAGATTTT
GCCTGGGAGT TGACACGCAA ATCGGAGTTC GGACTGGATA TGGGATTTTT ACATGATAAA
ATCCTGCTGT ACGCCAGCTA CTACTTATAT CGCTCGAGTA ATCAACTTGT ATCTTATCCA
CTACCTGATA TTACAGGCGC AGGAAGCATT ATTGGCAATC TACCTGCTGT TATCCGTAAC
AATGGATTGG AACTCGTACT ATCCGCACAG CATATCCGAA ATAAAAACTT CGAATGGGCT
TCTTCATTTA ATATCACTTT CGGGCGCAAT CAACTACTGC GTTATCCCGA TCCTACTATT
CCAATGCAAA GTTCAGTGGG ATTTGTAGAA GGTCAGGCAC TTTCCCAGTT ATATGTGGCT
ACTGCTATGG GCGTAGATCC TGCCACAGGT ACGTATCAGT TTGCCGATGC CAATCATCAT
CCTGTGCCGG CTAATAAGGC GGTAGAAAGT AAACCGATAG ATATGGCGCC TGTTTGCTAT
GGAGGCTGGC GGAATAACTT TCAATGGCGT GGCTTCGGAC TAGAAGTATT ACTACAATTC
ACAAAACAAC GAGGGCTGAA CACAATTTTC GATCCTAATT ATATGCCAGG CTATCTGCAA
AACCAGTATG CAGTCGTATT ATCCAGATGG CAGCAAGCGG GAGATATCGC TACTTATCAA
AGATATACAC AGACGGGGAG TCTCCGGGAT GGATATCGAC AAGCCATTGA GAGTGATCTG
GGATATACAG ACGCCTCTTT TATACGTTGC CGCTATGTGG AAGCCAGTTG GTCATTCCCC
AGCAAACTAT TACAAAGCCT GCATTTGCAG GAAGGGAAAT GTTACCTGCA GGGACAAAAT
TTATTCACAT GGACAAGCTA TAAAGGACTT GACGCTGAAA CACAGTCAAA GACAACACTG
CCGCCATTGA GGATGGTCAG CTGCGGATTA AAAATAGCAT TATAA
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| Protein sequence | MGMPERTKCC TLFLLLYTCC LLQVHGQQGR NSVSISGRHL SLQQLFNKIQ EQTSYYFSYG
ADVDLSRTIN VDFKQTTLQT VLNTILAKDY SWEFDGRSIN IRMIPSTTLP PNPTHTPVSD
SPTLIQGKAL DETVIIAYGT TTHRFNTGNV TAIKGESIAG QSGTNPLLAL QGRVPGLLVT
QTGGIGGMAM KVQLRGQNSL ENGTQPLFII DGIPYNPILS GGLGSQIWGE KASAFNFINP
EDVESIDVLK DADATAIYGS RGANGVILIN TRKGKAGKTV LRFNIATGLT HTGRHVQLLN
TQQYLEMRNE AFRNDGVKPT ERNAPDLLKW DPARYTDWQK ALIGGTGKNI STQASMSGGS
NTYQYLISGH YRRETMVFPG SFADTRGGLH LSTNANSTDQ RFSATFTGSF LADKTTLPGF
DFTSSILLPP NTPPAYLEDG SLNYSWLNPY IGLVGPLFNA DVKNLLANIG LQYRLLPGLV
LKTNVGYNWL TGRSSSLTPL AIYAPAIRNT RTGSSQHFHY EGISRIIEPQ ATYTLDKCAW
HLQFLAGGTL QGYNENQDAL YADGFKSDAL LNNIYYADTV YGKTETAAYR YVALFGRMGI
NYKNRYLLNL SVRRDGSSRF GPRKQFASFG AIGAAWIFTE APFAKPLQRI LSFGKLRASY
GTTGNDQIGD YQYLGQYKNV DGTYQNVTGL RPASLFNADF AWELTRKSEF GLDMGFLHDK
ILLYASYYLY RSSNQLVSYP LPDITGAGSI IGNLPAVIRN NGLELVLSAQ HIRNKNFEWA
SSFNITFGRN QLLRYPDPTI PMQSSVGFVE GQALSQLYVA TAMGVDPATG TYQFADANHH
PVPANKAVES KPIDMAPVCY GGWRNNFQWR GFGLEVLLQF TKQRGLNTIF DPNYMPGYLQ
NQYAVVLSRW QQAGDIATYQ RYTQTGSLRD GYRQAIESDL GYTDASFIRC RYVEASWSFP
SKLLQSLHLQ EGKCYLQGQN LFTWTSYKGL DAETQSKTTL PPLRMVSCGL KIAL
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