Gene Cpin_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0052 
Symbol 
ID8356149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp62333 
End bp63127 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content44% 
IMG OID644962197 
Producthypothetical protein 
Protein accessionYP_003119759 
Protein GI256419106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAC CTAAAGAAAA CAGACACGTC ATTAAAAGAG TCCGCAGTCA TTCAAAAGAA 
ACACTGCACA ACGATAAAAG ATTTCAACGC GTTCGCGACA ACTGGAAGGA TTTTACCAGG
GCAGCCCGCT ATGCAAAGCT GATGCGTACC GTCATGGAAA GTATGCAACA GCCCGTACAC
GACAGAAGCA GGCATACTAC GCTCACTAAA ACATTCTCAC AGATAATAAA ATCAGACACT
GATGCCCCTC CCGGACAACG CAACATCAGG CCCGGATTAC TGCATCTGTT AACAGGCATA
GAATTAAATA CAGGAATTGC CTTGGATGAT CTTTTCATTT TCAATTACGC CATGACTGAA
TGCAATATGC GGGATGCAAC ACACTACTTA GACCACACGA TGTTATATCC TAAGATAATT
CGAAAAGTAT TACCTCCGGG TGTTGTTGAT TTTGAGATCA ATATCGGCGT AGCCGAAATA
GACTTTGAAC AACTTACCTT CAGGTGCTAT CAGCAATCTT CTGCTTTGAT ACCGGTAAAA
GGGAATAAAT TTTCCGGCGT AAAAATGGAA GCGCTTATTG GCCAGGAAGT ACCGGACCAT
TTATTTGTAT TCCTGGCAAT CAGTTGCTAC GACAAGGATA AACAGTTTAA AACCGGCGCA
ATTAGGCTGC TGAATGTTTT CGGTGCGCCG GGATACGGAG AATATTTATC TGCCACAAAA
GCAGACCAAA TGCTGCTCCC AGAATCATGT TCAGCAACTG ATACCGAAGC ACCACCGGAG
ATGCCAGCAC ACTAA
 
Protein sequence
MTSPKENRHV IKRVRSHSKE TLHNDKRFQR VRDNWKDFTR AARYAKLMRT VMESMQQPVH 
DRSRHTTLTK TFSQIIKSDT DAPPGQRNIR PGLLHLLTGI ELNTGIALDD LFIFNYAMTE
CNMRDATHYL DHTMLYPKII RKVLPPGVVD FEINIGVAEI DFEQLTFRCY QQSSALIPVK
GNKFSGVKME ALIGQEVPDH LFVFLAISCY DKDKQFKTGA IRLLNVFGAP GYGEYLSATK
ADQMLLPESC SATDTEAPPE MPAH