| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0041 |
|---|
| Symbol | |
|---|
| ID | 8356138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 46603 |
|---|
| End bp | 49251 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 882 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644962186 |
|---|
| Product | peptidase S9 prolyl oligopeptidase active site domain protein |
|---|
| Protein accession | YP_003119748 |
|---|
| Protein GI | 256419095 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG CGTCTTGTTA TTATAAGGTT CAATATAACC CAATAGTTCT GTTTATTATT
CTTTTTTTTG CTTGCTCTAA TGCGGTTGCG CAAAAATTAG TTTTTGACTA TGAGTCAATT
AAATCTTGGC AAACTCTTGG ACAATATGAT ATTTCCAATA ATGGAAGATA CATTTGGTAT
GAGAATCTAT CTGCGGTGGG TGATTCTCTT ATTATCTTAT CACGTGATGG GACTTCTCGA
AGAGCCTTTG ATGATTCTCG AGGTGCCGTT TTTTCGATTG ATAGTCGATG TGTGATTTTT
AGGCATGCAA AATCTGTGAG CGTATTTGAT TTGGAGAGAA ATAAGTTGCA TGGGTATCAA
AATGCAAAGA GTTTTATATG TTCTCCCCAA AAAAAATGGG CAGCTATTTT TTTTGATACC
TGTATCATCG TGAAGAATTT GATAAATTAT AAAGAGCAGA TTTTTAAGAA AGTTAGTAGA
TTTCAATTTG ATATTAATGA CGATGCTTGT TGGGGACAAA TCAATGATAG TCTTTTTTAT
TTTAATTTAA AAAATGAGAG TAAGACATTT TGTAGCTATG AAGTCATTCA AAGTGATATA
TCTTTTAGTG AAAAAGGAGA TTTAGTTGCG TTTAATTCGA AGCTTGCTGA TAGTAATATA
GTATCTATAT ATAAAAAAGT GAATGGGCGT ATTGAAAAGT GTGGTATCAT TAAAATAGCA
AATTTTGCAA ATGGCTATTA TATATCAGAT GAAAAGCCCT GGTTTGGCAA TGATGATAAT
TTTTTATTTC TTAAATTGAG AAGAAGAAAA AATGAGATAA TCAATCAGAA AATTTTTACT
GATAGGTTGA ATATTTGGCA CTATAAAGAT CGGTGGTTAC AATCTCAACA GCTTTTGCAT
TTAAATGAGG AGACATCTCA ATCTTATATT GGTGTTTGGT TACGTAAGGA GAAAAGGTTC
ATCCAACTTG AACATTTGGA TTCTACTTTG GTGAATTATC CTCGCGGGAA TTATGTTGTA
AAAAGAAGAA TAACAAATGA AGATGATGCT TATTGGAATA ATGAGGAAAC GTCATATTGT
CGATTATTTG ACATTTCTAG AAATAAGGAA ATTCGATTCA TGCCAGATTC TTCTAGGTAT
GGTTATTGGG ATATGTCGCG TTCTGAAAAG TATGTATTGT ATATGGATAC AATTACGCAA
CATATTTATT GTTATGAGAT CAATAGTAAG AATACGATAG ATCTAACGGA AGGAATATCT
TCAAGAAGGG ACTTCAGAGA TATGGGTCTT CGTCGGCCAA TACAATTTGA TTTTGGAGGA
TGGACTAAGG ATGAAAACGC CGTAATAATA TATGATAGAT ATGACCTATG GCTTGTCGAT
CCGAAAGGAA ATAATAAGGC AGTCTGTTTA ACGGATGGCT GGGGGACAGA GCAGAAAGTG
GTATTAAGAC TAGCTTGTAA ACTTGAGAAT TTTAGTCTAA ATGATTCTAT TCTCATATCT
GGGCTCAAAG AATCTAATAA ATGGAATGGG ATTTTTAAAG CAAAATTGAG CTGGAATAAG
AGTAAGTTAA ATGGTGAGTT AGGCCCATAT GTATATTATT TTCCGGCATT GTATTTTGGT
TCACCTATGC CTCCAATAAA GGGAGGCAAC TCTAATATAT TTCTTTTGCA GAAGCAGAGT
GATACACTAG CATCTAATCT TTTTTTAACC CAAGATTTTC ACTTTTTTAA GCAACTCTCT
TTTTTTTCTC CTCAAAAGAC ATATAATTGG GTGACTTCTA AATTGATACA ATGGACAGCA
TTGGATGGCT CAAATAGAAT GGGGATACTC TATAAACCGG AAAATTTTGA TAGTACGAAA
AAGTATCCAA TTATATTTAA TTATTATGAA TTGAGAAGTA ATGAGTGCTT CAAGTTTCTT
CGACCAGGTT TAAGTGTAGG AGGATTGAAT ATTCCTTGGT ATGTTAGTCG GGGGTATTTG
GTTTTTGTGC CAGATATATG GGGCCATTCC ATTTATCGTG GAGAGAGTGC CTTATCTTCT
ATTGTATCTG CAGCTAATTA CTTAACTGCA AAATATAATT GGATTGATGC AAAAAAAATG
GCTTTGCAAG GTCATAGTTT TGGAGGGTTC GAGACAAATT ATATTGTTTC TCATAGTGAT
CTTTTTGCGG CAGCTCAAGC CTCTGCTGGA CCATCGGATT TTATAAGTGG TTTTGGCGCA
ATTGGTTTTG GTGGAAGAAG TCTCGCAAAT TTGCATGAAG AAGGCCAACT TAACTTGCGT
GCAACTCCGT GGGATAGACC AGACATCTAT GTGGAGACCT CGCCGTTGTT CAATGTGAAG
AAAATTAGTA CCCCTTTGCT TTTAATGCAT AATACACAGG ATTTTTCAGT GCCGATTGCT
CAATCTATTG AGTTATATAT GGCTATGAGA AGATTGAAGA AACGAGTATG GTTATTGGAG
TATGATCAAG AAGAACATAC TCTAAGTAAT ATTGATAATA TGCTGGACTT TACCATCAGA
CAACAACAGT TTTTTGACTA TTACTTAAAA CAAAGCTTTC CTCCGTATTG GATGACAACA
GGTGTTCCTG CTAATGTTAA AGGATATATT TCTGGACTTG ATTTAGATTC TTCAAAAGCC
CAACCTTAA
|
|---|
| Protein sequence | MKIASCYYKV QYNPIVLFII LFFACSNAVA QKLVFDYESI KSWQTLGQYD ISNNGRYIWY
ENLSAVGDSL IILSRDGTSR RAFDDSRGAV FSIDSRCVIF RHAKSVSVFD LERNKLHGYQ
NAKSFICSPQ KKWAAIFFDT CIIVKNLINY KEQIFKKVSR FQFDINDDAC WGQINDSLFY
FNLKNESKTF CSYEVIQSDI SFSEKGDLVA FNSKLADSNI VSIYKKVNGR IEKCGIIKIA
NFANGYYISD EKPWFGNDDN FLFLKLRRRK NEIINQKIFT DRLNIWHYKD RWLQSQQLLH
LNEETSQSYI GVWLRKEKRF IQLEHLDSTL VNYPRGNYVV KRRITNEDDA YWNNEETSYC
RLFDISRNKE IRFMPDSSRY GYWDMSRSEK YVLYMDTITQ HIYCYEINSK NTIDLTEGIS
SRRDFRDMGL RRPIQFDFGG WTKDENAVII YDRYDLWLVD PKGNNKAVCL TDGWGTEQKV
VLRLACKLEN FSLNDSILIS GLKESNKWNG IFKAKLSWNK SKLNGELGPY VYYFPALYFG
SPMPPIKGGN SNIFLLQKQS DTLASNLFLT QDFHFFKQLS FFSPQKTYNW VTSKLIQWTA
LDGSNRMGIL YKPENFDSTK KYPIIFNYYE LRSNECFKFL RPGLSVGGLN IPWYVSRGYL
VFVPDIWGHS IYRGESALSS IVSAANYLTA KYNWIDAKKM ALQGHSFGGF ETNYIVSHSD
LFAAAQASAG PSDFISGFGA IGFGGRSLAN LHEEGQLNLR ATPWDRPDIY VETSPLFNVK
KISTPLLLMH NTQDFSVPIA QSIELYMAMR RLKKRVWLLE YDQEEHTLSN IDNMLDFTIR
QQQFFDYYLK QSFPPYWMTT GVPANVKGYI SGLDLDSSKA QP
|
|---|
| |