Gene Cpin_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0032 
Symbol 
ID8356129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp38269 
End bp39789 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content39% 
IMG OID644962180 
Producthypothetical protein 
Protein accessionYP_003119742 
Protein GI256419089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0423403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA AAGCCCCATT ATTTTCTAAA GCTTTTGTTT ATGATATTTT AGATAGAAAA 
GATAATAGAT GGTTATTGTT CGGCTCTACT ATATTGGCGA TATTTTTTCT AATATTAATT
CTTCGGCTTT ATCCTTATCC CAACTTCCTC CCTGATTCTT ATTCCTACAT AGACGCCGCA
CTCAATAACG TCAATATCAA CATGTGGCCA GTCGGCTATT CAAAATTCCT CCGGTTTATA
AGCGTCTTCA ATAGATCTAG TGCAGGACTG GTTATTTTCC AATACATGCT ATTACAATTC
TCAATACTAT TCTTTTTATT TTCAATCAAA TATTTACTAG CGCCTGGTAA ATGGCTCATT
GGTACATTGT TCGCTCTACT AGTACTGAAT CCCCTCTGGC TATACATCTC TAACTTTGTA
TCGAGCGATG CACTATTCGC GACCTTCAGC TTACTCTGGC TAACTACCCT GTTCTGGCTC
ATTTATGAAC CCAATATAAG AATGTTCGTA TTTCATGCAC TAATACTAGG TTTTGTATTT
TCTGTGCGAT ATAACGCTTT ATATTATCCA ATTATCAGCA TCTTGGTGAT TTTTATGACC
AAAGGCGTAC TAAAGGAAAA GTTGTTGAGA ATAGCTATTG TATTACTCCC TGTGGCCTGG
TTCGTCACAT ATACTACCTT GACTTTTAAA GAGCAACTCG GTGTTTCGAT ATTCTCCCCT
TTTGGAGGCT GGCAAATGGG CAGTAATGCA TTGTTTATGT ATGCCCATGT TCCCCCTAAA
CGGACAAACA TCCCTAAACA ATTTGTGAAG CTGCATAATT TCACTATACA GCATATGGAC
TCGCTTAGTA AACTCAAGCA ACGTCCTGAC GGCGAACTTG GGATCTATTA CTTATGGGAT
GAAAAGGCGC CTTTAAAGCT CTATTTAGCC GACAAGTATA AAAAAGACAG CACTACGCCG
TATCTAAAGC GTTGGGCTTC TGTATCGCCT CTATATGGCC AATACGGTAC ATGGTTGATC
AAACAACATC CCGGTGCATT TCTGAAATAC TATATCTGGC CTAATTTTTT AAATTACTAC
TCACCTCCAA CTGAGTTCTT GGGCATTTAC AACATGGGTA GCGATACTGT TGATCCTGGT
GCAGTCAGCT GGTTTGGATA CAAATCCAAC AAGGTTCATC ATTTCTCCAA AAACAAAAAC
ATCATACTCA CTGCTATATT CCCTTTGTTA CTAGCCATGA TCAATGTGAT CTTCTTCTTC
GGATTCATCG GTTTTGTAAT ACTGGGAGGT TTTTCAAAAG TCAGCCCATA CTACCGGAAA
GTCCTATGGG TAATGCTAAT GATCTGGCTA GGTAACCTTG CGTTTAGTGT ACTGGCGTCG
CCAATAGTAT TAAGATACCA GGCATTTCCA TTTATATTCA CGCTGACTTT CGCAGTGCTA
TTATTAGGTT TTGTCATCCA AGAAAGCCGG CAAGAATCAA AGCCGGCCGA AGAAAACCCA
ATTCCCGACC CAGCCATATA A
 
Protein sequence
MKFKAPLFSK AFVYDILDRK DNRWLLFGST ILAIFFLILI LRLYPYPNFL PDSYSYIDAA 
LNNVNINMWP VGYSKFLRFI SVFNRSSAGL VIFQYMLLQF SILFFLFSIK YLLAPGKWLI
GTLFALLVLN PLWLYISNFV SSDALFATFS LLWLTTLFWL IYEPNIRMFV FHALILGFVF
SVRYNALYYP IISILVIFMT KGVLKEKLLR IAIVLLPVAW FVTYTTLTFK EQLGVSIFSP
FGGWQMGSNA LFMYAHVPPK RTNIPKQFVK LHNFTIQHMD SLSKLKQRPD GELGIYYLWD
EKAPLKLYLA DKYKKDSTTP YLKRWASVSP LYGQYGTWLI KQHPGAFLKY YIWPNFLNYY
SPPTEFLGIY NMGSDTVDPG AVSWFGYKSN KVHHFSKNKN IILTAIFPLL LAMINVIFFF
GFIGFVILGG FSKVSPYYRK VLWVMLMIWL GNLAFSVLAS PIVLRYQAFP FIFTLTFAVL
LLGFVIQESR QESKPAEENP IPDPAI