| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0030 |
|---|
| Symbol | |
|---|
| ID | 8356127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 34570 |
|---|
| End bp | 35058 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644962178 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003119740 |
|---|
| Protein GI | 256419087 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0252535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTAT TGTTTGTAGC CCTGTTATTG ATAGGGATAT TTAGTTGCGA AAGACAACGG
CCTTTGCCGC CAGGAATCGG CAGGAAAATG CCCGATTTCA AAATTCAACT GTTAGATACC
GCTGTTAAGA TCAACACTGC ATCTATTCCT AAAGGCAAAC CAGTGGTATT GTTTTTCTTC
GGACCTGACT GTCCATATTG TCAGGCATTA ACAAGAGAAT TGACAAAACG GATGGACGAA
CTGAAGGATA CCCGGTTTTA CTTTGTGACT GTAGCTGACT TTAAAGAGAT CCAGATGTAT
GACACATTGT TCAAGCTGGA TAAATTCCAA AATGTGACGA TTGGAAAGGA TGTTGATGGC
TTTTTCTTTA GTTATTATAA AGCGCCAGGG TTTCCTTATC TAGCGGTATA TAACAAGAAG
AAAGAGTTTA GGGAAATTAT CATTGGTGGT ATCAATGTTG ATTCGCTAAA GAAGGTGATA
AGGAGCTAA
|
|---|
| Protein sequence | MRVLFVALLL IGIFSCERQR PLPPGIGRKM PDFKIQLLDT AVKINTASIP KGKPVVLFFF
GPDCPYCQAL TRELTKRMDE LKDTRFYFVT VADFKEIQMY DTLFKLDKFQ NVTIGKDVDG
FFFSYYKAPG FPYLAVYNKK KEFREIIIGG INVDSLKKVI RS
|
|---|
| |