| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0010 |
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| Symbol | |
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| ID | 8356107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 14069 |
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| End bp | 14728 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644962158 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003119720 |
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| Protein GI | 256419067 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAGA AAAAATTCAT TGCTGTTGTT GACGATCACA CGATGTTCCG TAGAGGATTG
TCCGTGTTGA TTAACCTGTT CCCCAATTAT GAAGTATTGT TTGAAGCTGC CAGTGGGAAG
GAACTGATTG AAAAGATGAC CATTGAGCAG TTACCTGATA TCGTATTGCT GGACGTTAAT
ATGCCGGATA TGGATGGTTA CGCTTCTGCT GAGTGGTTAC ATCAGCATCA TCCTGATATC
CGTATACTGG CTTTAAGTAC CATGGATGCC GAAACAGCAA TCATAAAAAT GATCAGGCAT
GGCGCTAAAG GATATATACT AAAAGATGCA GAACCCAGTG AACTGAAACA GGCATTTGAT
GATGTAATTA CATTGGGATA CTATTACAAT GATACGGTCA CCCGTAAGGT GATGCAGTCA
ATTAATGCGC TGATAGACGA CAAATCAGCA TTGAATGCGA TCACCAAACT CAGCGACAGG
GAAATGGAAT TCCTACGGCT TGCCTGTAGC GAAAAAAGCT ACCAGCTAAT TGCGAAAGAG
ATGTTTGTCA GCGAGCGCAC TGTTGATGGA TATCGTGAGG CATTGTTCAA AAAACTCAGC
GTTTCAACAC GTGTAGGACT TGTATTGTAT GCGATAAAGA ACAAACTGGT GGTGGTGTGA
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| Protein sequence | MSKKKFIAVV DDHTMFRRGL SVLINLFPNY EVLFEAASGK ELIEKMTIEQ LPDIVLLDVN
MPDMDGYASA EWLHQHHPDI RILALSTMDA ETAIIKMIRH GAKGYILKDA EPSELKQAFD
DVITLGYYYN DTVTRKVMQS INALIDDKSA LNAITKLSDR EMEFLRLACS EKSYQLIAKE
MFVSERTVDG YREALFKKLS VSTRVGLVLY AIKNKLVVV
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