| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3922 |
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| Symbol | |
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| ID | 5744698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4818485 |
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| End bp | 4819669 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641295038 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001561008 |
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| Protein GI | 160882040 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAAGAG CATACAAAGT GGAATTAAAA CCAACGAACC AGCAGATACA GAAGATTAAT
CAATGTTTAG GCGTTTGCAG ATGGCTTTAT AACGCTTATC TTGCTAAGAA CCAATCACTT
TATCAAGACT TTAAAGAGGG TAAGCTTAAT AAGAAAAAAG CCTTTATGTC AGCCAATGAC
TTTGATAAGT ACATTAATAA TGATATTAAA GTTTTAGATG ATTGCAAGTG GATTAATGAT
TGTGGTAGTA AAGCTAGAAA AAAAGCTATT TGTAATGCAG AATTTGCGTA TAAGAAGTTT
TTTAAAGGTG AAGCACAATT TCCACGTTTT AAGAAGAAAG GTAAGTCTAA AGTAGGTTTA
TATTTTCCAA AGAATAATAA AACCGATTTC AAGATTGAAC GTCATAAAAT TAATATACCT
ACACTTAAAT GGGTTAGGCT TAAGGAATTT GGATATATCA AGGCCAATGC AAACGTCATT
AGTGGTACGG TCACAGAACA AGCAGGAAAA TATTATATTT CAATTGTTTG TGAAGTAGAA
GAAGTTAAGA ACTCCTTACC TAAAACAGAG CCATTAGGAC TAGATTTAGG AATAAAAGAT
TTTGCTATTT TTAGTAATGA AATAGTTAAG AAGAACATCA ATAAGACTTC AAGAGTAAAG
AAATTAGAAA AGAAGTTAAA ACGTGAACAA GTAAGGCTTT CAAGGAAATA TGAATGTCTT
AAAAAACAAA ATAAAATAAG AAAAGGGGAG ACCACTAGAC AGAATATTCG TAAGCAAATA
GTCAAAGTAC AAAGACTTCA ACAAAGATTA GCGAACATTC GTACTGATTA CATTAATAAA
TGTGTGTCTG AAATAGTAGG ACAAAAACCA AGTTCAATAA CTATTGAAGA TTTGAATGTA
AAAGGCATGA TGAAAAATCG CCACTTATCA AAAGCAGTTG CTGGGCAAAA GTTTTATGAG
TTCAGAATAA AACTTACCAA CAAATGTAAA CAAAACGATA TTGAACTTAG AATAGTAGAT
AGATGGTATC CATCTTCTAA GCTTTGCTCA TGTTGTGGAA ATGTCAAAAA AGACTTAAAA
CTTTCTGACA GAATTTATGT TTGTAAAGAG TGTGGTCTAG TAATTGATAG GGATTATCAA
GCTAGTATTA ATCTTAGAGA AGCAAAAACT TACATGATAG CATAA
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| Protein sequence | MQRAYKVELK PTNQQIQKIN QCLGVCRWLY NAYLAKNQSL YQDFKEGKLN KKKAFMSAND
FDKYINNDIK VLDDCKWIND CGSKARKKAI CNAEFAYKKF FKGEAQFPRF KKKGKSKVGL
YFPKNNKTDF KIERHKINIP TLKWVRLKEF GYIKANANVI SGTVTEQAGK YYISIVCEVE
EVKNSLPKTE PLGLDLGIKD FAIFSNEIVK KNINKTSRVK KLEKKLKREQ VRLSRKYECL
KKQNKIRKGE TTRQNIRKQI VKVQRLQQRL ANIRTDYINK CVSEIVGQKP SSITIEDLNV
KGMMKNRHLS KAVAGQKFYE FRIKLTNKCK QNDIELRIVD RWYPSSKLCS CCGNVKKDLK
LSDRIYVCKE CGLVIDRDYQ ASINLREAKT YMIA
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