| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3886 |
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| Symbol | |
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| ID | 5742283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4775742 |
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| End bp | 4777484 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641294999 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001560972 |
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| Protein GI | 160882004 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000303887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGC ATACAAAAAT TGCATTACTA TTTAGTATTT GTATTTCATT TGCTTTCTCT
TGCCTTTTAT TTATGGTAAG AGATCGAATA TTAACTTCCA ATCAAATAAG TTTAGAAAAC
CTGAATACAC AAATTGTTGA GTCAAAGGCA AACGAAATTG GCTCTTGGTT GAATCAGCGA
ATAAGTGAAA TTCGAGTGAT TAGTCAGACG GAAGCACTTC GAACAATGGA AACAAAAAGC
TTACAAACTT TTATCAAACG GTTAAATCAA AATGTTGGAG AGCATTATGG AAATGAATAC
GGGACATTTG CTGCCGGAAC GACAAATGGA CTTGGTTATG TCTGTGATGA ACAAACCATT
GACGTATCCA AACGTGATTA TTTTCAACAT GCCATGTCAA CCGATGAAGA ATACATCATT
AGTACTCCCT TACTTTCTAA AACAGATAGC TTGCCAATCA CACTCATTTG TTATCCAATA
TACGATGATG AGAATGAAAA AATTGGATTT ATTAATGGTG CGATTTCTCT GTATAAATTA
TCTGAAATTA CAGAAGGCAT TGATTTTTAT AATGGTTCTT CATGGATTAT GGATTCCAAA
GGAAATCTTT ATACCAGCAA TCCAATTCAA GGCATAAGCG CATCTGAGCT GGCAAATTTA
GTGTCGCATA TCAAAGAACC AATAGCAAAG AACGTTGGTC TTTTTTCATT TAAAGAAGAA
AAAGGGAAAG AACAAGTGGT ATTTTATTCT CCAATTCCAT ACTCCAATGG TTGGTCTTTA
TGTACTATGA CTTCTTTGAA GGAATTAAAT TTACATACAC AAAACTTAAT CTATACCATT
TTAGTGATAT GGATCCTTAT GCTTGCCATA TCTATCGTAA GTTGTTTCTT ATTTTCTCGT
ACCATTACTG CTCCTATTTA TAAGCTTTCA AAAGCAATGC AACTTGTAAA GGATGGAAGT
TTTGATTTAC CGAAACAGGT AATCAGTGGC AAAAAGGATG AACTTGCATT CCTTGCCAAT
AACTTTTACA CAATGACGGA ACAGATTTCC TTTCTAATGG AACGAATTAA GGAAGAAGAA
GTGGCAAAGC GTACTGCTGA ATTTCAGGTA TTACAATCAC AGATTAACCC TCATTTTTTA
TATAATACAC TGGATAATCT TCAATGGAGA GCCTATGATC ATAACGCCCT TGAGCTATCT
GAAATGATTG AGGCTTTGTC CGATTTCTTC CGAATTTCTC TCAGTGATGG CAAAGAATTT
ATTTCTGTGA TAAAGGAAAT TGAACATGTT AAGAGTTACC TATTTATTCA ACAAAAACGT
TATGAAGATA TTTTAAACTT TACCATTTCC TGTGACCCTG ATGTCTCAGA ATATGTTACA
ATCAAACTGA TTGTGCAGCC ATTGGTTGAA AATGCACTGT ATCACGGAAT TAAACCAAAG
CTTTCCCATG GTACGATTGC TGTCAGAGTA TTAAGAAAAG AGGATACCAT TCAAATTATT
GTACAAGATG ATGGCGTTGG TATGTCACCC CCAAAACTTA AAACGTTACT CCGCTCATTG
GAACAGGACG CTCCCGGTAA GGGATATGGC CTATATAACA TTCACCGTAG AATACAAATG
GTGTATGGTA AGGAGTATGG TATTTCCATT ACCAGTGAAG AGCAGATTGG GACAACCGCT
ACGATTATTA TTCCAGCAGT AAAGGAGATG CAAAACAATG AGAAAATTAT TAATTGCAGA
TGA
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| Protein sequence | MKLHTKIALL FSICISFAFS CLLFMVRDRI LTSNQISLEN LNTQIVESKA NEIGSWLNQR
ISEIRVISQT EALRTMETKS LQTFIKRLNQ NVGEHYGNEY GTFAAGTTNG LGYVCDEQTI
DVSKRDYFQH AMSTDEEYII STPLLSKTDS LPITLICYPI YDDENEKIGF INGAISLYKL
SEITEGIDFY NGSSWIMDSK GNLYTSNPIQ GISASELANL VSHIKEPIAK NVGLFSFKEE
KGKEQVVFYS PIPYSNGWSL CTMTSLKELN LHTQNLIYTI LVIWILMLAI SIVSCFLFSR
TITAPIYKLS KAMQLVKDGS FDLPKQVISG KKDELAFLAN NFYTMTEQIS FLMERIKEEE
VAKRTAEFQV LQSQINPHFL YNTLDNLQWR AYDHNALELS EMIEALSDFF RISLSDGKEF
ISVIKEIEHV KSYLFIQQKR YEDILNFTIS CDPDVSEYVT IKLIVQPLVE NALYHGIKPK
LSHGTIAVRV LRKEDTIQII VQDDGVGMSP PKLKTLLRSL EQDAPGKGYG LYNIHRRIQM
VYGKEYGISI TSEEQIGTTA TIIIPAVKEM QNNEKIINCR
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