Gene Cphy_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3863 
Symbol 
ID5744816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4744376 
End bp4745365 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content39% 
IMG OID641294976 
ProductABC transporter related 
Protein accessionYP_001560949 
Protein GI160881981 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACGA TTATTACAGT TGAAAATTTG ATTAAGAAGT ACGAGACCTA TAAAAGAGGC 
AGTGGATTTA AGGAGAGTGT TAAAACCTTT TTCCATAGGG AGAAAGTTCC GGTATTGGCG
GTAAACGATA TCTCCTTCAC CGCAGAAGAG GGGGATATCA TCGGTATTCT TGGACCCAAT
GGCGCAGGTA AATCTACAAC AATTAAAATG TTAACTGGTA CGCTGTACCC TACCAGCGGT
AATATCAGTG TAATGGGCTT CAATCCAACG AAGAACAGAA AAACTTATGT CCATCAAATT
GGGGCAGTAT TTGGACAAAA GTCACAGCTA ATATGGGACA TACCGCCAAT TGATAGCTTT
CGAATGAACA AAGCGATTTA CAACATATCA GACCAGGATT ATAAAGAGCG AATAGAAGTT
ATGTCTAAGC TTTTTGGAGT AGAGGACTAT ATCACAAGAC CAACCAGAGT TCTTTCCCTT
GGTGAGAGAA TGAAATGTGA GTTTATAATG GCCATGCTGC ATCAGCCAAG GGTAGTATTC
TTAGATGAAC CGACAATTGG TCTGGATGTC ATAGCAAAGC AAAAAATTAG AGAATTTATC
CGGGAAATGA ACAAGCGAGG AACCACCTTT ATTCTCACCA CCCATGATTT GGAGGATGTG
GAACAGTTGG CTAAGAATAT CGTTATCATT AATCACGGAG AGAAGGTATT TGACGATTCT
ATTGAAAATC TTAGAAAGGT TCTGGGGGCG AAGAAAATCG TTCACTTGGT ATTACAGCAG
CCGATTAAGG ATTTGAATAT CGAAGGAGCA AGCATTATAG AAAGAGAGTC TGAGTTGAAT
ATAACCATCA GCGTGGATCT TGATGTAATC TCCATAAATA ATTTCATGGC AAGGTTTTCC
GAAAGATGTG ACTTTACTGA TATCTCAATT AAGGAAATGC CGATGGAGGC TATTATTACA
TATATTTATC AGAGTAAGAA AGAAGGATGA
 
Protein sequence
MGTIITVENL IKKYETYKRG SGFKESVKTF FHREKVPVLA VNDISFTAEE GDIIGILGPN 
GAGKSTTIKM LTGTLYPTSG NISVMGFNPT KNRKTYVHQI GAVFGQKSQL IWDIPPIDSF
RMNKAIYNIS DQDYKERIEV MSKLFGVEDY ITRPTRVLSL GERMKCEFIM AMLHQPRVVF
LDEPTIGLDV IAKQKIREFI REMNKRGTTF ILTTHDLEDV EQLAKNIVII NHGEKVFDDS
IENLRKVLGA KKIVHLVLQQ PIKDLNIEGA SIIERESELN ITISVDLDVI SINNFMARFS
ERCDFTDISI KEMPMEAIIT YIYQSKKEG